Information for 17-AGGTCCCTAC (Motif 43)

C G T A A C T G A C T G A C G T A G T C G T A C A G T C A C G T C G T A A G T C
Reverse Opposite:
A C T G A C G T C G T A A C T G A C T G A C T G C G T A A G T C A G T C A C G T
p-value:1e-3
log p-value:-8.217e+00
Information Content per bp:1.960
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.42%
Number of Background Sequences with motif8.9
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.0 +/- 24.3bp
Average Position of motif in Background45.4 +/- 34.1bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:AGGTCCCTAC--
AGGTCTCTAACC
 C G T A A C T G A C T G A C G T A G T C G T A C A G T C A C G T C G T A A G T C A C G T A C G T
C T G A T C A G A C T G C A G T A G T C G A C T A G T C A C G T C G T A G C T A A T G C G A T C

NR4A2/MA0160.1/Jaspar

Match Rank:2
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AGGTCCCTAC
AAGGTCAC---
 A C G T C G T A A C T G A C T G A C G T A G T C G T A C A G T C A C G T C G T A A G T C
C T G A C T G A A C T G C T A G G A C T A G T C C G T A T G A C A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AGGTCCCTAC
AGGTCA----
 C G T A A C T G A C T G A C G T A G T C G T A C A G T C A C G T C G T A A G T C
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T

Esrrb(NR)/mES-Esrrb-ChIP-Seq(GSE11431)/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:reverse strand
Alignment:---AGGTCCCTAC
TCAAGGTCAN---
 A C G T A C G T A C G T C G T A A C T G A C T G A C G T A G T C G T A C A G T C A C G T C G T A A G T C
A G C T T A G C C T G A T C G A A T C G C A T G C A G T A T G C T C G A G T A C A C G T A C G T A C G T

RORA/MA0071.1/Jaspar

Match Rank:5
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----AGGTCCCTAC
ATCAAGGTCA----
 A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A G T C G T A C A G T C A C G T C G T A A G T C
C G T A G C A T T G A C C G T A C T G A A C T G A C T G A C G T A G T C C G T A A C G T A C G T A C G T A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:6
Score:0.61
Offset:-2
Orientation:forward strand
Alignment:--AGGTCCCTAC
TRAGGTCA----
 A C G T A C G T C G T A A C T G A C T G A C G T A G T C G T A C A G T C A C G T C G T A A G T C
G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T A C G T A C G T A C G T

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGGTCCCTAC
AGRGGTCA----
 A C G T A C G T C G T A A C T G A C T G A C G T A G T C G T A C A G T C A C G T C G T A A G T C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T

Esrrg/MA0643.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---AGGTCCCTAC
TCAAGGTCAT---
 A C G T A C G T A C G T C G T A A C T G A C T G A C G T A G T C G T A C A G T C A C G T C G T A A G T C
G A C T T A G C C T G A T C G A C A T G A T C G C A G T A G T C C T G A G C A T A C G T A C G T A C G T

PB0053.1_Rara_1/Jaspar

Match Rank:9
Score:0.58
Offset:-6
Orientation:forward strand
Alignment:------AGGTCCCTAC
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A G T C G T A C A G T C A C G T C G T A A G T C
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

PB0049.1_Nr2f2_1/Jaspar

Match Rank:10
Score:0.57
Offset:-6
Orientation:forward strand
Alignment:------AGGTCCCTAC
TCTCAAAGGTCACGAG
 A C G T A C G T A C G T A C G T A C G T A C G T C G T A A C T G A C T G A C G T A G T C G T A C A G T C A C G T C G T A A G T C
C A G T G T A C A C G T G T A C C G T A C T G A C T G A A C T G A C T G A C G T A G T C C T G A G T A C T A C G C G T A A C T G