Information for 23-TGAGGAGGGAACGKGA (Motif 40)

A C G T A T C G C G T A C T A G C T A G C T G A C A T G A C T G C T A G T C G A C G T A A T G C A C T G A C G T A C T G C T G A
Reverse Opposite:
A G C T A G T C T G C A G T A C A T C G A C G T A C G T A G T C G T A C G A T C A G C T A G T C G A T C A C G T T A G C T G C A
p-value:1e-4
log p-value:-9.841e+00
Information Content per bp:1.782
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif13.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets45.9 +/- 22.4bp
Average Position of motif in Background46.5 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)2.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

E2F6/MA0471.1/Jaspar

Match Rank:1
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TGAGGAGGGAACGKGA
--GGGCGGGAAGG---
 A C G T A T C G C G T A C T A G C T A G C T G A C A T G A C T G C T A G T C G A C G T A A T G C A C T G A C G T A C T G C T G A
A C G T A C G T C T A G T C A G A C T G G T A C C T A G A C T G T A C G C G T A C T G A T C A G T C A G A C G T A C G T A C G T

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.57
Offset:3
Orientation:forward strand
Alignment:TGAGGAGGGAACGKGA
---GGCGGGAARN---
 A C G T A T C G C G T A C T A G C T A G C T G A C A T G A C T G C T A G T C G A C G T A A T G C A C T G A C G T A C T G C T G A
A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G A C G T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:forward strand
Alignment:TGAGGAGGGAACGKGA
-CWGGCGGGAA-----
 A C G T A T C G C G T A C T A G C T A G C T G A C A T G A C T G C T A G T C G A C G T A A T G C A C T G A C G T A C T G C T G A
A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A A C G T A C G T A C G T A C G T A C G T

ZNF189(Zf)/HEK293-ZNF189.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.57
Offset:6
Orientation:forward strand
Alignment:TGAGGAGGGAACGKGA
------TGGAACAGMA
 A C G T A T C G C G T A C T A G C T A G C T G A C A T G A C T G C T A G T C G A C G T A A T G C A C T G A C G T A C T G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G T C A G T G C A G C T A A T G C T C G A A T C G G T C A T G C A

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:5
Score:0.56
Offset:7
Orientation:forward strand
Alignment:TGAGGAGGGAACGKGA---
-------GWAAYHTGAKMC
 A C G T A T C G C G T A C T A G C T A G C T G A C A T G A C T G C T A G T C G A C G T A A T G C A C T G A C G T A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:6
Score:0.54
Offset:7
Orientation:reverse strand
Alignment:TGAGGAGGGAACGKGA---
-------GWAAYHTGABMC
 A C G T A T C G C G T A C T A G C T A G C T G A C A T G A C T G C T A G T C G A C G T A A T G C A C T G A C G T A C T G C T G A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

HIF2a(bHLH)/785_O-HIF2a-ChIP-Seq(GSE34871)/Homer

Match Rank:7
Score:0.54
Offset:6
Orientation:reverse strand
Alignment:TGAGGAGGGAACGKGA
------GGGTACGTGC
 A C G T A T C G C G T A C T A G C T A G C T G A C A T G A C T G C T A G T C G A C G T A A T G C A C T G A C G T A C T G C T G A
A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T C G T C A G C A G T C T G A A T G C A C T G A G C T A C T G G T A C

PRDM1/MA0508.1/Jaspar

Match Rank:8
Score:0.53
Offset:1
Orientation:forward strand
Alignment:TGAGGAGGGAACGKGA
-AGAAAGTGAAAGTGA
 A C G T A T C G C G T A C T A G C T A G C T G A C A T G A C T G C T A G T C G A C G T A A T G C A C T G A C G T A C T G C T G A
A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

TBX21/MA0690.1/Jaspar

Match Rank:9
Score:0.52
Offset:1
Orientation:forward strand
Alignment:TGAGGAGGGAACGKGA
-AAGGTGTGAA-----
 A C G T A T C G C G T A C T A G C T A G C T G A C A T G A C T G C T A G T C G A C G T A A T G C A C T G A C G T A C T G C T G A
A C G T C T G A C T G A C T A G A C T G A G C T C A T G G A C T A C T G C T G A G C T A A C G T A C G T A C G T A C G T A C G T

PB0097.1_Zfp281_1/Jaspar

Match Rank:10
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:TGAGGAGGGAACGKGA
-GGGGGGGGGGGGGGA
 A C G T A T C G C G T A C T A G C T A G C T G A C A T G A C T G C T A G T C G A C G T A A T G C A C T G A C G T A C T G C T G A
A C G T A C T G C T A G C A T G C A T G A C T G C A T G C A T G C T A G C T A G C A T G A T C G C A T G C A T G T C A G G C T A