Information for 20-GACCGCACAGGGGGAA (Motif 32)

A C T G C G T A A G T C A G T C A C T G A G T C C T G A A G T C C G T A A C T G C T A G A C T G A C T G A C T G C G T A C T G A
Reverse Opposite:
A G C T A C G T A G T C G T A C A G T C A G T C A G T C A C G T A C T G A G C T C T A G G T A C C T A G A C T G A C G T A G T C
p-value:1e-7
log p-value:-1.720e+01
Information Content per bp:1.914
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets51.0 +/- 19.4bp
Average Position of motif in Background56.3 +/- 1.7bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.50
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0205.1_Zic1_2/Jaspar

Match Rank:1
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GACCGCACAGGGGGAA-
--CCACACAGCAGGAGA
 A C T G C G T A A G T C A G T C A C T G A G T C C T G A A G T C C G T A A C T G C T A G A C T G A C T G A C T G C G T A C T G A A C G T
A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.57
Offset:2
Orientation:forward strand
Alignment:GACCGCACAGGGGGAA-
--GAGCACAGCAGGACA
 A C T G C G T A A G T C A G T C A C T G A G T C C T G A A G T C C G T A A C T G C T A G A C T G A C T G A C T G C G T A C T G A A C G T
A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0103.1_Zic3_1/Jaspar

Match Rank:3
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GACCGCACAGGGGGAA
-NCCCCCCCGGGGGGN
 A C T G C G T A A G T C A G T C A C T G A G T C C T G A A G T C C G T A A C T G C T A G A C T G A C T G A C T G C G T A C T G A
A C G T T C G A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G T A C G A C T G C A T G C A T G C A T G T A C G

PB0204.1_Zfp740_2/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:GACCGCACAGGGGGAA---
--ANTNCCGGGGGGAANTT
 A C T G C G T A A G T C A G T C A C T G A G T C C T G A A G T C C G T A A C T G C T A G A C T G A C T G A C T G C G T A C T G A A C G T A C G T A C G T
A C G T A C G T C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T

PB0102.1_Zic2_1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:GACCGCACAGGGGGAA
-ACCCCCCCGGGGGGN
 A C T G C G T A A G T C A G T C A C T G A G T C C T G A A G T C C G T A A C T G C T A G A C T G A C T G A C T G C G T A C T G A
A C G T T G C A T A G C G T A C G T A C G T A C G T A C A T G C T G A C A T C G A T C G A C T G C A T G C A T G C A T G T A C G

MZF1(var.2)/MA0057.1/Jaspar

Match Rank:6
Score:0.56
Offset:6
Orientation:forward strand
Alignment:GACCGCACAGGGGGAA
------GGAGGGGGAA
 A C T G C G T A A G T C A G T C A C T G A G T C C T G A A G T C C G T A A C T G C T A G A C T G A C T G A C T G C G T A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C T G C A G T G T C A A C T G A C T G A T C G A C T G C A T G C T G A C T G A

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GACCGCACAGGGGGAA
GGACCACCCACG-----
 A C G T A C T G C G T A A G T C A G T C A C T G A G T C C T G A A G T C C G T A A C T G C T A G A C T G A C T G A C T G C G T A C T G A
C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G A C G T A C G T A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GACCGCACAGGGGGAA-
--CCACACAGCAGGAGA
 A C T G C G T A A G T C A G T C A C T G A G T C C T G A A G T C C G T A A C T G C T A G A C T G A C T G A C T G C G T A C T G A A C G T
A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.55
Offset:8
Orientation:forward strand
Alignment:GACCGCACAGGGGGAA--
--------GGCGGGAARN
 A C T G C G T A A G T C A G T C A C T G A G T C C T G A A G T C C G T A A C T G C T A G A C T G A C T G A C T G C G T A C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

PB0101.1_Zic1_1/Jaspar

Match Rank:10
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GACCGCACAGGGGGAA
--CCCCCCCGGGGGNN
 A C T G C G T A A G T C A G T C A C T G A G T C C T G A A G T C C G T A A C T G C T A G A C T G A C T G A C T G C G T A C T G A
A C G T A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G