Information for 19-GCGTGGAAACACAGTG (Motif 29)

A T C G G A T C A C T G C A G T A C T G C T A G C G T A C G T A C G T A G T A C C G T A T A G C C G T A A C T G A C G T A T C G
Reverse Opposite:
A T G C T C G A A G T C C G A T A C T G C G A T A C T G A C G T A C G T G A C T A G T C A G T C G C T A G T A C C A T G A T G C
p-value:1e-8
log p-value:-1.959e+01
Information Content per bp:1.697
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.98%
Number of Background Sequences with motif14.3
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets44.1 +/- 28.4bp
Average Position of motif in Background50.9 +/- 28.8bp
Strand Bias (log2 ratio + to - strand density)-0.7
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GCGTGGAAACACAGTG
-----GGAACAAAGR-
 A T C G G A T C A C T G C A G T A C T G C T A G C G T A C G T A C G T A G T A C C G T A T A G C C G T A A C T G A C G T A T C G
A C G T A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G A C G T

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:GCGTGGAAACACAGTG
-----AAAACAAAGG-
 A T C G G A T C A C T G C A G T A C T G C T A G C G T A C G T A C G T A G T A C C G T A T A G C C G T A A C T G A C G T A T C G
A C G T A C G T A C G T A C G T A C G T T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T

SOX10/MA0442.1/Jaspar

Match Rank:3
Score:0.59
Offset:8
Orientation:reverse strand
Alignment:GCGTGGAAACACAGTG
--------ACAAAG--
 A T C G G A T C A C T G C A G T A C T G C T A G C G T A C G T A C G T A G T A C C G T A T A G C C G T A A C T G A C G T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T

DMRT1(DM)/Testis-DMRT1-ChIP-Seq(GSE64892)/Homer

Match Rank:4
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GCGTGGAAACACAGTG--
---TWGHWACAWTGTWDC
 A T C G G A T C A C T G C A G T A C T G C T A G C G T A C G T A C G T A G T A C C G T A T A G C C G T A A C T G A C G T A T C G A C G T A C G T
A C G T A C G T A C G T G C A T C G A T C T A G G C T A G C A T C G T A G A T C G C T A C G A T C G A T C T A G C G A T C G T A C G A T G A T C

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:5
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GCGTGGAAACACAGTG
-----VRRACAAWGG-
 A T C G G A T C A C T G C A G T A C T G C T A G C G T A C G T A C G T A G T A C C G T A T A G C C G T A A C T G A C G T A T C G
A C G T A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T

Sox6/MA0515.1/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:reverse strand
Alignment:GCGTGGAAACACAGTG
-----AAAACAATGG-
 A T C G G A T C A C T G C A G T A C T G C T A G C G T A C G T A C G T A G T A C C G T A T A G C C G T A A C T G A C G T A T C G
A C G T A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G A C G T

FOXP1/MA0481.1/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-GCGTGGAAACACAGTG
CAAAAGTAAACAAAG--
 A C G T A T C G G A T C A C T G C A G T A C T G C T A G C G T A C G T A C G T A G T A C C G T A T A G C C G T A A C T G A C G T A T C G
G T A C G C T A C G T A T C G A C T G A T C A G G C A T C G T A C G T A C G T A T G A C C G T A T G C A C G T A T C A G A C G T A C G T

PB0071.1_Sox4_1/Jaspar

Match Rank:8
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCGTGGAAACACAGTG---
--AGAAGAACAAAGGACTA
 A T C G G A T C A C T G C A G T A C T G C T A G C G T A C G T A C G T A G T A C C G T A T A G C C G T A A C T G A C G T A T C G A C G T A C G T A C G T
A C G T A C G T G T C A A C T G C T G A C G T A C T A G T C G A C G T A A G T C C G T A C G T A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

PB0061.1_Sox11_1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:forward strand
Alignment:GCGTGGAAACACAGTG---
--ATAAGAACAAAGGACTA
 A T C G G A T C A C T G C A G T A C T G C T A G C G T A C G T A C G T A G T A C C G T A T A G C C G T A A C T G A C G T A T C G A C G T A C G T A C G T
A C G T A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

DMRT6(DM)/Testis-DMRT6-ChIP-Seq(GSE60440)/Homer

Match Rank:10
Score:0.56
Offset:3
Orientation:forward strand
Alignment:GCGTGGAAACACAGTG--
---YDGHTACAWTGTADC
 A T C G G A T C A C T G C A G T A C T G C T A G C G T A C G T A C G T A G T A C C G T A T A G C C G T A A C T G A C G T A T C G A C G T A C G T
A C G T A C G T A C G T G A C T C G A T C A T G G C T A G C A T C G T A A G T C G C T A G C A T C G A T T A C G G C A T C G T A C A G T G A T C