Information for 14-WWATCCCMYRMCYCRG (Motif 24)

C G A T C G A T C G T A A C G T A G T C G T A C A G T C G T C A A G C T T C A G G T C A A G T C A G T C A G T C C T G A A C T G
Reverse Opposite:
A G T C G A C T A C T G C T A G A C T G A C G T A G T C C T G A A C G T A C T G A C T G A C T G C G T A A C G T C G T A G C T A
p-value:1e-8
log p-value:-2.029e+01
Information Content per bp:1.803
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif3.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets30.0 +/- 21.4bp
Average Position of motif in Background56.1 +/- 21.4bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PITX3/MA0714.1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--WWATCCCMYRMCYCRG
CTTAATCCC---------
 A C G T A C G T C G A T C G A T C G T A A C G T A G T C G T A C A G T C G T C A A G C T T C A G G T C A A G T C A G T C A G T C C T G A A C T G
T A G C G A C T G C A T C T G A C T G A C A G T G T A C A G T C G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0121.1_Obox1/Jaspar

Match Rank:2
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----WWATCCCMYRMCYCRG
NTAGTTAATCCCCTTAN----
 A C G T A C G T A C G T A C G T A C G T C G A T C G A T C G T A A C G T A G T C G T A C A G T C G T C A A G C T T C A G G T C A A G T C A G T C A G T C C T G A A C T G
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A A C G T A C G T A C G T A C G T

PB0098.1_Zfp410_1/Jaspar

Match Rank:3
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----WWATCCCMYRMCYCRG
NNNTCCATCCCATAANN---
 A C G T A C G T A C G T A C G T C G A T C G A T C G T A A C G T A G T C G T A C A G T C G T C A A G C T T C A G G T C A A G T C A G T C A G T C C T G A A C T G
A C G T G C A T G T C A A C G T T G A C G A T C G C T A A G C T G A T C G A T C G A T C C G T A C A G T G C T A G T C A A G C T G C T A A C G T A C G T A C G T

RHOXF1/MA0719.1/Jaspar

Match Rank:4
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-WWATCCCMYRMCYCRG
ATAATCCC---------
 A C G T C G A T C G A T C G T A A C G T A G T C G T A C A G T C G T C A A G C T T C A G G T C A A G T C A G T C A G T C C T G A A C T G
G C T A C G A T C T G A C G T A A C G T A G T C A G T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:5
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----WWATCCCMYRMCYCRG
NTTGTTAATCCCTCTNN----
 A C G T A C G T A C G T A C G T A C G T C G A T C G A T C G T A A C G T A G T C G T A C A G T C G T C A A G C T T C A G G T C A A G T C A G T C A G T C C T G A A C T G
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-WWATCCCMYRMCYCRG
TTAATCCC---------
 A C G T C G A T C G A T C G T A A C G T A G T C G T A C A G T C G T C A A G C T T C A G G T C A A G T C A G T C A G T C C T G A A C T G
G A C T G C A T T C G A C G T A C A G T G A T C G A T C G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:7
Score:0.59
Offset:0
Orientation:forward strand
Alignment:WWATCCCMYRMCYCRG
TAATCCCN--------
 C G A T C G A T C G T A A C G T A G T C G T A C A G T C G T C A A G C T T C A G G T C A A G T C A G T C A G T C C T G A A C T G
C G A T C T G A C G T A C A G T A G T C G A T C G A T C A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0139.1_Pitx3/Jaspar

Match Rank:8
Score:0.58
Offset:-6
Orientation:reverse strand
Alignment:------WWATCCCMYRMCYCRG
GNNAGCTAATCCCCCN------
 A C G T A C G T A C G T A C G T A C G T A C G T C G A T C G A T C G T A A C G T A G T C G T A C A G T C G T C A A G C T T C A G G T C A A G T C A G T C A G T C C T G A A C T G
A T C G T A C G G A T C G T C A T A C G G T A C C G A T C G T A C T G A A C G T A G T C A G T C G A T C A T G C A G T C A G C T A C G T A C G T A C G T A C G T A C G T A C G T

PH0122.1_Obox2/Jaspar

Match Rank:9
Score:0.58
Offset:-5
Orientation:reverse strand
Alignment:-----WWATCCCMYRMCYCRG
ATAGTTAATCCCCCTCA----
 A C G T A C G T A C G T A C G T A C G T C G A T C G A T C G T A A C G T A G T C G T A C A G T C G T C A A G C T T C A G G T C A A G T C A G T C A G T C C T G A A C T G
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--WWATCCCMYRMCYCRG
CCTAATCCGC--------
 A C G T A C G T C G A T C G A T C G T A A C G T A G T C G T A C A G T C G T C A A G C T T C A G G T C A A G T C A G T C A G T C C T G A A C T G
T G A C G A T C C G A T G C T A G C T A A C G T G T A C A G T C A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T