Information for 12-GCYCTTCAGYCCTCWG (Motif 21)

A C T G G T A C A G C T A G T C A G C T A C G T A T G C C G T A A C T G A G T C A G T C A G T C A C G T A G T C C G T A C A T G
Reverse Opposite:
G T A C G C A T A C T G C G T A A C T G A C T G T C A G A G T C A C G T A T C G G T C A C T G A A C T G T C G A A C T G G T A C
p-value:1e-9
log p-value:-2.231e+01
Information Content per bp:1.776
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets50.4 +/- 27.3bp
Average Position of motif in Background54.6 +/- 5.1bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:1
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:GCYCTTCAGYCCTCWG
-----CNAGGCCT---
 A C T G G T A C A G C T A G T C A G C T A C G T A T G C C G T A A C T G A G T C A G T C A G T C A C G T A G T C C G T A C A T G
A C G T A C G T A C G T A C G T A C G T A T G C G A T C C T G A A C T G A C T G A G T C A G T C A G C T A C G T A C G T A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:GCYCTTCAGYCCTCWG----
------CAGGCCNNGGCCNN
 A C T G G T A C A G C T A G T C A G C T A C G T A T G C C G T A A C T G A G T C A G T C A G T C A C G T A G T C C G T A C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GCYCTTCAGYCCTCWG
-------AGGCCTAG-
 A C T G G T A C A G C T A G T C A G C T A C G T A T G C C G T A A C T G A G T C A G T C A G T C A C G T A G T C C G T A C A T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T

PB0099.1_Zfp691_1/Jaspar

Match Rank:4
Score:0.55
Offset:2
Orientation:forward strand
Alignment:GCYCTTCAGYCCTCWG---
--CGAACAGTGCTCACTAT
 A C T G G T A C A G C T A G T C A G C T A C G T A T G C C G T A A C T G A G T C A G T C A G T C A C G T A G T C C G T A C A T G A C G T A C G T A C G T
A C G T A C G T A G T C C A T G G C T A T C G A G A T C T C G A A C T G C G A T C T A G G T A C A G C T A G T C T G C A A G T C G C A T C T G A C G A T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:GCYCTTCAGYCCTCWG------
--GCCTCCTCCMTCWGACTGKS
 A C T G G T A C A G C T A G T C A G C T A C G T A T G C C G T A A C T G A G T C A G T C A G T C A C G T A G T C C G T A C A T G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

PLAG1/MA0163.1/Jaspar

Match Rank:6
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GCYCTTCAGYCCTCWG
CCCCCTTGGGCCCC--
 A C T G G T A C A G C T A G T C A G C T A C G T A T G C C G T A A C T G A G T C A G T C A G T C A C G T A G T C C G T A C A T G
A G T C G T A C A G T C A G T C G A T C A C G T C G A T C A T G T C A G A T C G G T A C A G T C G A T C A G T C A C G T A C G T

TBX20/MA0689.1/Jaspar

Match Rank:7
Score:0.52
Offset:3
Orientation:reverse strand
Alignment:GCYCTTCAGYCCTCWG
---CTTCACACCTA--
 A C T G G T A C A G C T A G T C A G C T A C G T A T G C C G T A A C T G A G T C A G T C A G T C A C G T A G T C C G T A C A T G
A C G T A C G T A C G T A G T C G C A T G C A T G T A C G T C A T G A C G T C A G T A C A G T C G A C T G C T A A C G T A C G T

RARA/MA0729.1/Jaspar

Match Rank:8
Score:0.52
Offset:-4
Orientation:reverse strand
Alignment:----GCYCTTCAGYCCTCWG
CATTGACCTTTTGACCTC--
 A C G T A C G T A C G T A C G T A C T G G T A C A G C T A G T C A G C T A C G T A T G C C G T A A C T G A G T C A G T C A G T C A C G T A G T C C G T A C A T G
T G A C G T C A C G A T A G C T C T A G C G T A G T A C G T A C A C G T G C A T G C A T A G C T A T C G T C G A G T A C A G T C A G C T G A T C A C G T A C G T

POL002.1_INR/Jaspar

Match Rank:9
Score:0.51
Offset:5
Orientation:forward strand
Alignment:GCYCTTCAGYCCTCWG
-----TCAGTCTT---
 A C T G G T A C A G C T A G T C A G C T A C G T A T G C C G T A A C T G A G T C A G T C A G T C A C G T A G T C C G T A C A T G
A C G T A C G T A C G T A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T A C G T A C G T A C G T

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:10
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:GCYCTTCAGYCCTCWG----
------NTGCCCANNGGTNA
 A C T G G T A C A G C T A G T C A G C T A C G T A T G C C G T A A C T G A G T C A G T C A G T C A C G T A G T C C G T A C A T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A