Information for 8-ATTTTTATGCCTTCTT (Motif 14)

C G T A A C G T C G A T A C G T A C G T A C G T C G T A A C G T A C T G A T G C A G T C A C G T A C G T A G T C A G C T A G C T
Reverse Opposite:
C T G A C T G A A C T G C G T A C G T A A C T G A T C G A G T C C G T A A C G T C G T A C G T A C G T A C G T A G T C A C G A T
p-value:1e-11
log p-value:-2.576e+01
Information Content per bp:1.925
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif0.5
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.8 +/- 30.1bp
Average Position of motif in Background12.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0064.1_Hoxb9/Jaspar

Match Rank:1
Score:0.72
Offset:-2
Orientation:reverse strand
Alignment:--ATTTTTATGCCTTCTT
NGANTTTTATGGCTCN--
 A C G T A C G T C G T A A C G T C G A T A C G T A C G T A C G T C G T A A C G T A C T G A T G C A G T C A C G T A C G T A G T C A G C T A G C T
G A T C C A T G C T G A C G T A G C A T C G A T C G A T C G A T C G T A A G C T C A T G C T A G T A G C A G C T A G T C A G C T A C G T A C G T

CDX2/MA0465.1/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:reverse strand
Alignment:ATTTTTATGCCTTCTT
--TTTTATGGCTN---
 C G T A A C G T C G A T A C G T A C G T A C G T C G T A A C G T A C T G A T G C A G T C A C G T A C G T A G T C A G C T A G C T
A C G T A C G T A G C T A C G T A C G T A C G T C G T A A C G T C A T G C T A G A G T C G A C T A G C T A C G T A C G T A C G T

PH0056.1_Hoxa9/Jaspar

Match Rank:3
Score:0.65
Offset:-3
Orientation:reverse strand
Alignment:---ATTTTTATGCCTTCTT
ANTAATTTTATGGCCGN--
 A C G T A C G T A C G T C G T A A C G T C G A T A C G T A C G T A C G T C G T A A C G T A C T G A T G C A G T C A C G T A C G T A G T C A G C T A G C T
G C T A G A C T G C A T G C T A C G T A G C A T C G A T C G A T C G A T C G T A G A C T C A T G C T A G T A G C G A T C A C T G G A C T A C G T A C G T

Cdx2(Homeobox)/mES-Cdx2-ChIP-Seq(GSE14586)/Homer

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:ATTTTTATGCCTTCTT
-NTTTTATGAC-----
 C G T A A C G T C G A T A C G T A C G T A C G T C G T A A C G T A C T G A T G C A G T C A C G T A C G T A G T C A G C T A G C T
A C G T C T G A C G A T A C G T A C G T A C G T C G T A A C G T C A T G C T G A A G T C A C G T A C G T A C G T A C G T A C G T

PH0013.1_Cdx2/Jaspar

Match Rank:5
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-ATTTTTATGCCTTCTT
NAATTTTATTACCNNN-
 A C G T C G T A A C G T C G A T A C G T A C G T A C G T C G T A A C G T A C T G A T G C A G T C A C G T A C G T A G T C A G C T A G C T
C T G A G T C A C T G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T A G C T G C A T A C G T

HOXA10/MA0899.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:ATTTTTATGCCTTCTT
-NTTTTATTACN----
 C G T A A C G T C G A T A C G T A C G T A C G T C G T A A C G T A C T G A T G C A G T C A C G T A C G T A G T C A G C T A G C T
A C G T C A G T C A G T C A G T G C A T G C A T C G T A A G C T A C G T C T G A A G T C G A T C A C G T A C G T A C G T A C G T

PH0012.1_Cdx1/Jaspar

Match Rank:7
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-ATTTTTATGCCTTCTT
NAATTTTATTACCTNN-
 A C G T C G T A A C G T C G A T A C G T A C G T A C G T C G T A A C G T A C T G A T G C A G T C A C G T A C G T A G T C A G C T A G C T
C G A T G T C A T C G A C G A T C G A T C G A T C G A T C G T A A G C T C A G T C T G A A G T C G A T C A C G T G A C T G C T A A C G T

CDX1/MA0878.1/Jaspar

Match Rank:8
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATTTTTATGCCTTCTT
--TTTTATTGC-----
 C G T A A C G T C G A T A C G T A C G T A C G T C G T A A C G T A C T G A T G C A G T C A C G T A C G T A G T C A G C T A G C T
A C G T A C G T C A G T C G A T G C A T C G A T C G T A A G C T C A G T C T A G A G T C A C G T A C G T A C G T A C G T A C G T

PH0047.1_Hoxa11/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-ATTTTTATGCCTTCTT
NNGTTTTACGACTTTA-
 A C G T C G T A A C G T C G A T A C G T A C G T A C G T C G T A A C G T A C T G A T G C A G T C A C G T A C G T A G T C A G C T A G C T
G T C A G A C T C T A G C G A T C A G T C G A T C G A T C G T A A G T C C A T G C T G A A G T C G A C T C G A T G A C T C G T A A C G T

PH0046.1_Hoxa10/Jaspar

Match Rank:10
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--ATTTTTATGCCTTCTT
TNAATTTTATTACCTN--
 A C G T A C G T C G T A A C G T C G A T A C G T A C G T A C G T C G T A A C G T A C T G A T G C A G T C A C G T A C G T A G T C A G C T A G C T
G C A T C A T G G T C A C G T A C G A T C G A T G C A T C G A T C G T A G A C T C A G T C T G A A G T C T G A C C A G T G T C A A C G T A C G T