Information for 23-AGTTGGATCAAGT (Motif 48)

C T G A A C T G A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A G T C A A C T G A C G T
Reverse Opposite:
G T C A A G T C A C G T C G A T A C T G C G T A A C G T A G T C A G T C C G T A G T C A G T A C A G C T
p-value:1e-3
log p-value:-9.091e+00
Information Content per bp:1.933
Number of Target Sequences with motif2.0
Percentage of Target Sequences with motif0.28%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets41.0 +/- 29.0bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RHOXF1/MA0719.1/Jaspar

Match Rank:1
Score:0.64
Offset:3
Orientation:reverse strand
Alignment:AGTTGGATCAAGT
---NGGATTAN--
 C T G A A C T G A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A G T C A A C T G A C G T
A C G T A C G T A C G T C A T G C T A G A C T G G T C A A C G T G A C T G C T A C G A T A C G T A C G T

PB0157.1_Rara_2/Jaspar

Match Rank:2
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AGTTGGATCAAGT-
AGAGCGGGGTCAAGTA
 A C G T A C G T C T G A A C T G A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A G T C A A C T G A C G T A C G T
G T C A C A T G G T C A C A T G A G T C A T C G T A C G A C T G C A T G C G A T A G T C C T G A G T C A A C T G A C G T G T C A

Atf4(bZIP)/MEF-Atf4-ChIP-Seq(GSE35681)/Homer

Match Rank:3
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGTTGGATCAAGT
-ATTGCATCAK--
 C T G A A C T G A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A G T C A A C T G A C G T
A C G T T C G A A C G T A C G T C T A G A G T C T C G A G C A T G T A C C T G A A C G T A C G T A C G T

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:4
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AGTTGGATCAAGT---
----GKVTCADRTTWC
 C T G A A C T G A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A G T C A A C T G A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G C A T G T G C A A C G T A G T C C G T A C A T G T C A G A C G T A C G T G C T A A G T C

Chop(bZIP)/MEF-Chop-ChIP-Seq(GSE35681)/Homer

Match Rank:5
Score:0.56
Offset:1
Orientation:forward strand
Alignment:AGTTGGATCAAGT
-ATTGCATCAT--
 C T G A A C T G A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A G T C A A C T G A C G T
A C G T T C G A G C A T A C G T C T A G G T A C T C G A G C A T T G A C T C G A A C G T A C G T A C G T

DMRT3/MA0610.1/Jaspar

Match Rank:6
Score:0.55
Offset:1
Orientation:forward strand
Alignment:AGTTGGATCAAGT
-AATGTATCAAT-
 C T G A A C T G A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A G T C A A C T G A C G T
A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T

PH0125.1_Obox5_2/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-AGTTGGATCAAGT---
NANAGGGATTAATTATN
 A C G T C T G A A C T G A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A G T C A A C T G A C G T A C G T A C G T A C G T
T C G A C T G A T C A G T C G A T C A G T C A G A C T G G C T A A C G T C G A T C G T A C G T A G C A T G A C T T C G A G C A T T G A C

NKX2-8/MA0673.1/Jaspar

Match Rank:8
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:AGTTGGATCAAGT--
------NTCAAGTGG
 C T G A A C T G A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A G T C A A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T C G A T A T G C C T G A C T G A C T A G C A G T C T A G A T C G

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:AGTTGGATCAAGT
---GGGATTAA--
 C T G A A C T G A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A G T C A A C T G A C G T
A C G T A C G T A C G T C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T

PH0123.1_Obox3/Jaspar

Match Rank:10
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--AGTTGGATCAAGT--
TGAGGGGGATTAACTAT
 A C G T A C G T C T G A A C T G A C G T A C G T A C T G A C T G C G T A A C G T A G T C C G T A G T C A A C T G A C G T A C G T A C G T
G C A T A T C G T C G A T A C G C T A G C T A G C T A G C A T G G C T A A C G T G A C T C G T A C G T A G T A C C G A T G T C A G A C T