Information for 10-YTWCATTCAGAYT (Motif 18)

A G C T A C G T C G T A A G T C C G T A A C G T A C G T A T G C C G T A A C T G T C G A A G T C A C G T
Reverse Opposite:
C G T A C T A G A G C T A G T C A C G T T A C G C G T A C G T A A C G T A C T G C G A T C G T A C T G A
p-value:1e-10
log p-value:-2.521e+01
Information Content per bp:1.830
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.84%
Number of Background Sequences with motif3.3
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets54.3 +/- 22.9bp
Average Position of motif in Background49.1 +/- 1.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0028.1_Hbp1_1/Jaspar

Match Rank:1
Score:0.72
Offset:-3
Orientation:reverse strand
Alignment:---YTWCATTCAGAYT
NNCATTCATTCATNNN
 A C G T A C G T A C G T A G C T A C G T C G T A A G T C C G T A A C G T A C G T A T G C C G T A A C T G T C G A A G T C A C G T
T C G A G A C T G T A C C G T A A G C T G A C T T G A C C G T A C G A T G C A T A T G C C G T A C G A T G C T A A C T G C G A T

PB0169.1_Sox15_2/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:reverse strand
Alignment:-----YTWCATTCAGAYT
TNGAATTTCATTNAN---
 A C G T A C G T A C G T A C G T A C G T A G C T A C G T C G T A A G T C C G T A A C G T A C G T A T G C C G T A A C T G T C G A A G T C A C G T
A G C T A T G C C T A G C T G A G T C A G A C T C A G T G C A T T G A C C T G A C A G T G A C T A G T C T G C A T G C A A C G T A C G T A C G T

PB0178.1_Sox8_2/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:forward strand
Alignment:YTWCATTCAGAYT---
--ACATTCATGACACG
 A G C T A C G T C G T A A G T C C G T A A C G T A C G T A T G C C G T A A C T G T C G A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PB0170.1_Sox17_2/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--YTWCATTCAGAYT--
GACCACATTCATACAAT
 A C G T A C G T A G C T A C G T C G T A A G T C C G T A A C G T A C G T A T G C C G T A A C T G T C G A A G T C A C G T A C G T A C G T
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

bZIP:IRF(bZIP,IRF)/Th17-BatF-ChIP-Seq(GSE39756)/Homer

Match Rank:5
Score:0.59
Offset:-3
Orientation:forward strand
Alignment:---YTWCATTCAGAYT--
NAGTTTCABTHTGACTNW
 A C G T A C G T A C G T A G C T A C G T C G T A A G T C C G T A A C G T A C G T A T G C C G T A A C T G T C G A A G T C A C G T A C G T A C G T
A G T C C T G A A T C G A G C T A G C T G A C T A G T C G C T A A C G T C G A T G C A T C G A T A T C G C G T A T A G C G C A T A T G C C G T A

PB0171.1_Sox18_2/Jaspar

Match Rank:6
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---YTWCATTCAGAYT
NNNNTGAATTCANNNC
 A C G T A C G T A C G T A G C T A C G T C G T A A G T C C G T A A C G T A C G T A T G C C G T A A C T G T C G A A G T C A C G T
A C T G C A T G G A T C G C T A A G C T C T A G G T C A C T G A G A C T C A G T G A T C T C G A T A C G A G C T T G A C G A T C

PB0005.1_Bbx_1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--YTWCATTCAGAYT
NANTTCATTGAATTA
 A C G T A C G T A G C T A C G T C G T A A G T C C G T A A C G T A C G T A T G C C G T A A C T G T C G A A G T C A C G T
G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

IRF:BATF(IRF:bZIP)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.57
Offset:-1
Orientation:forward strand
Alignment:-YTWCATTCAGAYT-
CTTTCANTATGACTV
 A C G T A G C T A C G T C G T A A G T C C G T A A C G T A C G T A T G C C G T A A C T G T C G A A G T C A C G T A C G T
A T G C G A C T A G C T A G C T A G T C G C T A C A G T C G A T G C T A A C G T A C T G G C T A T A G C G C A T T G A C

PH0084.1_Irx3_2/Jaspar

Match Rank:9
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----YTWCATTCAGAYT
NNTATTACATGTANNNT
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A A G T C C G T A A C G T A C G T A T G C C G T A A C T G T C G A A G T C A C G T
G C A T C T G A G C A T G C T A A C G T C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A C G A T G C T A G C A T G C A T

PB0176.1_Sox5_2/Jaspar

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---YTWCATTCAGAYT
TATCATAATTAAGGA-
 A C G T A C G T A C G T A G C T A C G T C G T A A G T C C G T A A C G T A C G T A T G C C G T A A C T G T C G A A G T C A C G T
C G A T G C T A C G A T A G T C C T G A C A G T T G C A G C T A G C A T G A C T C G T A T G C A T A C G C A T G C G T A A C G T