Information for 7-GCTGACMSWTTTA (Motif 16)

A C T G A G T C A C G T A C T G C G T A A G T C G T C A A T C G C G A T A C G T A C G T A C G T C G T A
Reverse Opposite:
A C G T C G T A C G T A C G T A C G T A T A C G A C G T A C T G A C G T A G T C C G T A A C T G A G T C
p-value:1e-11
log p-value:-2.578e+01
Information Content per bp:1.900
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif1.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.6 +/- 12.1bp
Average Position of motif in Background72.4 +/- 11.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-GCTGACMSWTTTA
TGCTGACTCA----
 A C G T A C T G A G T C A C G T A C T G C G T A A G T C G T C A A T C G C G A T A C G T A C G T A C G T C G T A
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:2
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----GCTGACMSWTTTA
AATTTGCTGAC-------
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A G T C G T C A A T C G C G A T A C G T A C G T A C G T C G T A
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Mafb/MA0117.2/Jaspar

Match Rank:3
Score:0.65
Offset:-5
Orientation:forward strand
Alignment:-----GCTGACMSWTTTA
AAAATGCTGACT------
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A G T C G T C A A T C G C G A T A C G T A C G T A C G T C G T A
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T A C G T A C G T A C G T

RORA(var.2)/MA0072.1/Jaspar

Match Rank:4
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:GCTGACMSWTTTA--
-TTGACCTANTTATN
 A C T G A G T C A C G T A C T G C G T A A G T C G T C A A T C G C G A T A C G T A C G T A C G T C G T A A C G T A C G T
A C G T A G C T A C G T A C T G C G T A A G T C A G T C A G C T C G T A T A G C C G A T A C G T G C T A G C A T C G T A

RORgt(NR)/EL4-RORgt.Flag-ChIP-Seq(GSE56019)/Homer

Match Rank:5
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:GCTGACMSWTTTA
--TGACCTARTT-
 A C T G A G T C A C G T A C T G C G T A A G T C G T C A A T C G C G A T A C G T A C G T A C G T C G T A
A C G T A C G T A G C T C T A G T C G A A G T C A T G C A G C T T G C A T C A G G C A T C G A T A C G T

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:6
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCTGACMSWTTTA
VGCTGWCAVB----
 A C G T A C T G A G T C A C G T A C T G C G T A A G T C G T C A A T C G C G A T A C G T A C G T A C G T C G T A
T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C A C G T A C G T A C G T A C G T

MAFK/MA0496.1/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----GCTGACMSWTTTA
AAANTGCTGACTNAG---
 A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A G T C G T C A A T C G C G A T A C G T A C G T A C G T C G T A
C G T A C G T A C G T A G C A T C G A T A T C G G T A C A C G T A C T G C T G A A T G C G C A T G A T C C G T A C A T G A C G T A C G T A C G T

MafF(bZIP)/HepG2-MafF-ChIP-Seq(GSE31477)/Homer

Match Rank:8
Score:0.60
Offset:-6
Orientation:reverse strand
Alignment:------GCTGACMSWTTTA
AAAWWTGCTGACWWD----
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A G T C G T C A A T C G C G A T A C G T A C G T A C G T C G T A
C T G A C G T A C G T A G C T A G C A T G C A T T C A G G T A C G C A T C A T G C G T A A T G C G C A T G C A T C A T G A C G T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:9
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GCTGACMSWTTTA
-TTGACAG-----
 A C T G A G T C A C G T A C T G C G T A A G T C G T C A A T C G C G A T A C G T A C G T A C G T C G T A
A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G A C G T A C G T A C G T A C G T A C G T

PB0041.1_Mafb_1/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------GCTGACMSWTTTA
AAATTTGCTGACTTAGA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G A G T C A C G T A C T G C G T A A G T C G T C A A T C G C G A T A C G T A C G T A C G T C G T A
G C T A C T G A C G T A G C A T C A G T G C A T C A T G G T A C G C A T C A T G C G T A A G T C C G A T G C A T C T G A C T A G G T A C A C G T A C G T