Information for 5-WGTTAAATGGGAGAGT (Motif 9)

C G T A A C T G G C A T C G A T C G T A G T C A G T C A C G A T C T A G A T C G T A C G C G T A A C T G C T G A A T C G A G C T
Reverse Opposite:
T C G A A T G C A G C T A G T C C G A T A T G C A T G C A G T C G C T A A C G T A C G T C G A T C G T A C G T A G T A C C G A T
p-value:1e-11
log p-value:-2.550e+01
Information Content per bp:1.737
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.67%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.2 +/- 26.8bp
Average Position of motif in Background9.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0167.1_Sox13_2/Jaspar

Match Rank:1
Score:0.57
Offset:3
Orientation:forward strand
Alignment:WGTTAAATGGGAGAGT----
---GTATTGGGTGGGTAATT
 C G T A A C T G G C A T C G A T C G T A G T C A G T C A C G A T C T A G A T C G T A C G C G T A A C T G C T G A A T C G A G C T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G C G A T C T G A G A C T A G C T C A T G C A T G C T A G G C A T A C T G C A T G C A T G C G A T G C T A G C A T G C A T C A G T

YY2/MA0748.1/Jaspar

Match Rank:2
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:WGTTAAATGGGAGAGT
----TAATGGCGGNC-
 C G T A A C T G G C A T C G A T C G T A G T C A G T C A C G A T C T A G A T C G T A C G C G T A A C T G C T G A A T C G A G C T
A C G T A C G T A C G T A C G T G C A T C T G A C G T A G C A T C T A G A C T G A T G C T A C G C T A G G C T A G A T C A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:3
Score:0.53
Offset:3
Orientation:forward strand
Alignment:WGTTAAATGGGAGAGT--
---AGAAAGTGAAAGTGA
 C G T A A C T G G C A T C G A T C G T A G T C A G T C A C G A T C T A G A T C G T A C G C G T A A C T G C T G A A T C G A G C T A C G T A C G T
A C G T A C G T A C G T C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A

PB0201.1_Zfp281_2/Jaspar

Match Rank:4
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:WGTTAAATGGGAGAGT---
--NNNATTGGGGGTNTCCT
 C G T A A C T G G C A T C G A T C G T A G T C A G T C A C G A T C T A G A T C G T A C G C G T A A C T G C T G A A T C G A G C T A C G T A C G T A C G T
A C G T A C G T A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T

BARHL2/MA0635.1/Jaspar

Match Rank:5
Score:0.53
Offset:1
Orientation:forward strand
Alignment:WGTTAAATGGGAGAGT
-GCTAAACGGT-----
 C G T A A C T G G C A T C G A T C G T A G T C A G T C A C G A T C T A G A T C G T A C G C G T A A C T G C T G A A T C G A G C T
A C G T T A C G G A T C C G A T C G T A C G T A C G T A G A T C C T A G T C A G G A C T A C G T A C G T A C G T A C G T A C G T

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:6
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:WGTTAAATGGGAGAGT
RGSMTBCTGGGAAAT-
 C G T A A C T G G C A T C G A T C G T A G T C A G T C A C G A T C T A G A T C G T A C G C G T A A C T G C T G A A T C G A G C T
C T A G A C T G T A G C G T C A A G C T A G C T T G A C G A C T A C T G A C T G A C T G C G T A T C G A C G T A A C G T A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--WGTTAAATGGGAGAGT
NTNNTTAAGTGGNTNAN-
 A C G T A C G T C G T A A C T G G C A T C G A T C G T A G T C A G T C A C G A T C T A G A T C G T A C G C G T A A C T G C T G A A T C G A G C T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G A C G T

KLF5(Zf)/LoVo-KLF5-ChIP-Seq(GSE49402)/Homer

Match Rank:8
Score:0.52
Offset:7
Orientation:forward strand
Alignment:WGTTAAATGGGAGAGT-
-------DGGGYGKGGC
 C G T A A C T G G C A T C G A T C G T A G T C A G T C A C G A T C T A G A T C G T A C G C G T A A C T G C T G A A T C G A G C T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A C T A G A C T G A C T G G A C T C T A G C A G T C T A G C A T G G A T C

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:9
Score:0.52
Offset:0
Orientation:forward strand
Alignment:WGTTAAATGGGAGAGT
TGATTRATGGCY----
 C G T A A C T G G C A T C G A T C G T A G T C A G T C A C G A T C T A G A T C G T A C G C G T A A C T G C T G A A T C G A G C T
C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C A C G T A C G T A C G T A C G T

YY1/MA0095.2/Jaspar

Match Rank:10
Score:0.51
Offset:2
Orientation:forward strand
Alignment:WGTTAAATGGGAGAGT
--CAAGATGGCGGC--
 C G T A A C T G G C A T C G A T C G T A G T C A G T C A C G A T C T A G A T C G T A C G C G T A A C T G C T G A A T C G A G C T
A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C A C G T A C G T