Information for 9-TCCGAGGGTGTCACAT (Motif 19)

C G A T A T G C A G T C A C T G C G T A A C T G A C T G A C T G C G A T A T C G A G C T G A T C C G T A A T G C C T G A C G A T
Reverse Opposite:
G C T A A G C T T A C G A C G T C T A G C T G A A T G C C G T A A G T C A G T C A G T C C G A T G T A C C T A G A T C G C G T A
p-value:1e-8
log p-value:-1.975e+01
Information Content per bp:1.765
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets66.8 +/- 25.8bp
Average Position of motif in Background19.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0164.1_Six4/Jaspar

Match Rank:1
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:TCCGAGGGTGTCACAT--
-TNNNNGGTGTCATNTNT
 C G A T A T G C A G T C A C T G C G T A A C T G A C T G A C T G C G A T A T C G A G C T G A T C C G T A A T G C C T G A C G A T A C G T A C G T
A C G T A G C T T C A G T C G A C A G T C T G A T C A G A C T G A C G T C T A G A C G T G T A C C T G A C G A T C A G T G A C T G T C A C A G T

PB0059.1_Six6_1/Jaspar

Match Rank:2
Score:0.65
Offset:1
Orientation:forward strand
Alignment:TCCGAGGGTGTCACAT--
-AATAGGGTATCATATAT
 C G A T A T G C A G T C A C T G C G T A A C T G A C T G A C T G C G A T A T C G A G C T G A T C C G T A A T G C C T G A C G A T A C G T A C G T
A C G T C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0162.1_Six2/Jaspar

Match Rank:3
Score:0.63
Offset:1
Orientation:forward strand
Alignment:TCCGAGGGTGTCACAT--
-AATGGGGTATCACGTTT
 C G A T A T G C A G T C A C T G C G T A A C T G A C T G A C T G C G A T A T C G A G C T G A T C C G T A A T G C C T G A C G A T A C G T A C G T
A C G T C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TCCGAGGGTGTCACAT
TGCGTGGGYG------
 C G A T A T G C A G T C A C T G C G T A A C T G A C T G A C T G C G A T A T C G A G C T G A T C C G T A A T G C C T G A C G A T
C A G T T C A G G A T C A C T G A C G T C T A G A C T G A C T G G A C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PH0161.1_Six1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCCGAGGGTGTCACAT--
-GATGGGGTATCATTTTT
 C G A T A T G C A G T C A C T G C G T A A C T G A C T G A C T G C G A T A T C G A G C T G A T C C G T A A T G C C T G A C G A T A C G T A C G T
A C G T C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

Six3/MA0631.1/Jaspar

Match Rank:6
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCCGAGGGTGTCACAT--
-GATAGGGTATCACTAAT
 C G A T A T G C A G T C A C T G C G T A A C T G A C T G A C T G C G A T A T C G A G C T G A T C C G T A A T G C C T G A C G A T A C G T A C G T
A C G T C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCCGAGGGTGTCACAT--
-GATAGGGTATCACTAAT
 C G A T A T G C A G T C A C T G C G T A A C T G A C T G A C T G C G A T A T C G A G C T G A T C C G T A A T G C C T G A C G A T A C G T A C G T
A C G T C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCCGAGGGTGTCACAT--
-AATAGGGTATCAATTAT
 C G A T A T G C A G T C A C T G C G T A A C T G A C T G A C T G C G A T A T C G A G C T G A T C C G T A A T G C C T G A C G A T A C G T A C G T
A C G T C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

TBX2/MA0688.1/Jaspar

Match Rank:9
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TCCGAGGGTGTCACAT
----AAGGTGTGAAA-
 C G A T A T G C A G T C A C T G C G T A A C T G A C T G A C T G C G A T A T C G A G C T G A T C C G T A A T G C C T G A C G A T
A C G T A C G T A C G T A C G T C G T A C T G A T C A G A T C G A G C T C T A G G A C T A C T G C T G A C G T A C G T A A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:10
Score:0.58
Offset:1
Orientation:forward strand
Alignment:TCCGAGGGTGTCACAT--
-AATAGGGTATCAATATT
 C G A T A T G C A G T C A C T G C G T A A C T G A C T G A C T G C G A T A T C G A G C T G A T C C G T A A T G C C T G A C G A T A C G T A C G T
A C G T C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T