Information for 24-TATAHATTGTGTG (Motif 41)

A C G T C T G A A C G T C G T A G C T A C G T A A G C T C G A T A C T G A C G T A C T G A C G T A C T G
Reverse Opposite:
A G T C G T C A G T A C C G T A G T A C C G T A C T G A A C G T C G A T A C G T C G T A A G C T C G T A
p-value:1e-3
log p-value:-7.649e+00
Information Content per bp:1.801
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.55%
Number of Background Sequences with motif23.9
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets53.0 +/- 26.2bp
Average Position of motif in Background58.0 +/- 25.0bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.75
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TATAHATTGTGTG
NANTTATATATAANGN-
 A C G T A C G T A C G T A C G T A C G T C T G A A C G T C G T A G C T A C G T A A G C T C G A T A C T G A C G T A C T G A C G T A C T G
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A A C G T

POL012.1_TATA-Box/Jaspar

Match Rank:2
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TATAHATTGTGTG-
GTATAAAAGGCGGGG
 A C G T A C G T C T G A A C G T C G T A G C T A C G T A A G C T C G A T A C T G A C G T A C T G A C G T A C T G A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

TBP/MA0108.2/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-TATAHATTGTGTG-
GTATAAAAGGCGGGG
 A C G T A C G T C T G A A C G T C G T A G C T A C G T A A G C T C G A T A C T G A C G T A C T G A C G T A C T G A C G T
T A C G A G C T C G T A G A C T C G T A C G T A C T G A C G T A T C A G T A C G T A G C T A C G T A C G A T C G T A C G

PB0177.1_Sox7_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-TATAHATTGTGTG--------
GTGCTAATTGTGTGTGTACGCT
 A C G T A C G T C T G A A C G T C G T A G C T A C G T A A G C T C G A T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C T G C G A T T A C G A T G C C G A T G T C A C G T A G C A T G C A T T C A G G C A T T A C G G A C T T A C G G C A T T C A G A C G T C T G A G A T C A C T G T A G C A G C T

PB0208.1_Zscan4_2/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:TATAHATTGTGTG-----
--NNNNTTGTGTGCTTNN
 A C G T C T G A A C G T C G T A G C T A C G T A A G C T C G A T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A G C T C G T A C G A T C A G T C A G T C G A T C T A G A G C T A C T G C G A T A C T G A G T C A G C T C G A T A T G C C A T G

PB0074.1_Sox8_1/Jaspar

Match Rank:6
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-TATAHATTGTGTG---
GTATCTATTGTTCTTTA
 A C G T A C G T C T G A A C G T C G T A G C T A C G T A A G C T C G A T A C T G A C G T A C T G A C G T A C T G A C G T A C G T A C G T
C A G T C A G T C G T A C G A T A G C T G C A T C G T A G A C T C G A T T C A G C G A T G A C T G T A C G C A T C A G T C G A T C G T A

Foxq1/MA0040.1/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:TATAHATTGTGTG
AATAAACAATN--
 A C G T C T G A A C G T C G T A G C T A C G T A A G C T C G A T A C T G A C G T A C T G A C G T A C T G
G C T A T G C A A G C T C G T A C G T A C G T A A G T C C G T A C G T A A G C T C G T A A C G T A C G T

Sox17/MA0078.1/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:forward strand
Alignment:TATAHATTGTGTG
--CTCATTGTC--
 A C G T C T G A A C G T C G T A G C T A C G T A A G C T C G A T A C T G A C G T A C T G A C G T A C T G
A C G T A C G T G A C T G A C T G A T C C G T A A G C T A C G T A C T G A C G T A T G C A C G T A C G T

PB0066.1_Sox17_1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-TATAHATTGTGTG-
NNATNAATTGTTTNN
 A C G T A C G T C T G A A C G T C G T A G C T A C G T A A G C T C G A T A C T G A C G T A C T G A C G T A C T G A C G T
G C A T C T A G C G A T C G A T A G C T G C T A C G T A G C A T C G A T T C A G C G A T A C G T G A C T G C T A A C G T

Foxf1(Forkhead)/Lung-Foxf1-ChIP-Seq(GSE77951)/Homer

Match Rank:10
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---TATAHATTGTGTG
WWATRTAAACAN----
 A C G T A C G T A C G T A C G T C T G A A C G T C G T A G C T A C G T A A G C T C G A T A C T G A C G T A C T G A C G T A C T G
G C A T G C A T C T G A A C G T C T G A A C G T C G T A C G T A C G T A A G T C G T C A G T C A A C G T A C G T A C G T A C G T