Information for 12-AYCCTCCAATCAS (Motif 24)

C T G A A G C T A G T C G T A C A C G T A G T C A G T C C G T A G T C A C G A T A G T C C G T A A T C G
Reverse Opposite:
A T G C A C G T A C T G C G T A A C G T A C G T A C T G A C T G G T C A A C T G A C T G C T G A A G C T
p-value:1e-8
log p-value:-2.025e+01
Information Content per bp:1.850
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.69%
Number of Background Sequences with motif4.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets44.6 +/- 30.9bp
Average Position of motif in Background55.6 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYB/MA0502.1/Jaspar

Match Rank:1
Score:0.77
Offset:-2
Orientation:forward strand
Alignment:--AYCCTCCAATCAS
AAATGGACCAATCAG
 A C G T A C G T C T G A A G C T A G T C G T A C A C G T A G T C A G T C C G T A G T C A C G A T A G T C C G T A A T C G
T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

Dux/MA0611.1/Jaspar

Match Rank:2
Score:0.72
Offset:5
Orientation:forward strand
Alignment:AYCCTCCAATCAS
-----CCAATCAA
 C T G A A G C T A G T C G T A C A C G T A G T C A G T C C G T A G T C A C G A T A G T C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A

NFYA/MA0060.2/Jaspar

Match Rank:3
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:AYCCTCCAATCAS------
-TGGACCAATCAGCACTCT
 C T G A A G C T A G T C G T A C A C G T A G T C A G T C C G T A G T C A C G A T A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A G C T A T C G T C A G C T G A A T G C A G T C C G T A T C G A G A C T T A G C T C G A T C A G T G A C C T G A A T G C A C G T G T A C C G A T

POL004.1_CCAAT-box/Jaspar

Match Rank:4
Score:0.69
Offset:0
Orientation:forward strand
Alignment:AYCCTCCAATCAS
ACTAGCCAATCA-
 C T G A A G C T A G T C G T A C A C G T A G T C A G T C C G T A G T C A C G A T A G T C C G T A A T C G
G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A A C G T

NFY(CCAAT)/Promoter/Homer

Match Rank:5
Score:0.67
Offset:3
Orientation:forward strand
Alignment:AYCCTCCAATCAS
---AGCCAATCGG
 C T G A A G C T A G T C G T A C A C G T A G T C A G T C C G T A G T C A C G A T A G T C C G T A A T C G
A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

Gfi1/MA0038.1/Jaspar

Match Rank:6
Score:0.66
Offset:5
Orientation:forward strand
Alignment:AYCCTCCAATCAS--
-----CAAATCACTG
 C T G A A G C T A G T C G T A C A C G T A G T C A G T C C G T A G T C A C G A T A G T C C G T A A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G

PH0026.1_Duxbl/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:AYCCTCCAATCAS-----
-CGACCCAATCAACGGTG
 C T G A A G C T A G T C G T A C A C G T A G T C A G T C C G T A G T C A C G A T A G T C C G T A A T C G A C G T A C G T A C G T A C G T A C G T
A C G T A G T C C T A G C T G A A G T C A G T C A G T C G T C A G T C A A G C T A G T C C G T A C T G A A G T C T A C G T C A G G C A T T A C G

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:8
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AYCCTCCAATCAS
-SCTGTCAVTCAV
 C T G A A G C T A G T C G T A C A C G T A G T C A G T C C G T A G T C A C G A T A G T C C G T A A T C G
A C G T T A C G A T G C G A C T A C T G A G C T A G T C G T C A T G C A A C G T A G T C G C T A T G C A

EN2/MA0642.1/Jaspar

Match Rank:9
Score:0.60
Offset:4
Orientation:forward strand
Alignment:AYCCTCCAATCAS-
----CCCAATTAGC
 C T G A A G C T A G T C G T A C A C G T A G T C A G T C C G T A G T C A C G A T A G T C C G T A A T C G A C G T
A C G T A C G T A C G T A C G T T A G C A T G C A G T C T G C A T G C A A C G T A G C T C T G A T A C G A T G C

MSX2/MA0708.1/Jaspar

Match Rank:10
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AYCCTCCAATCAS
-----CCAATTAA
 C T G A A G C T A G T C G T A C A C G T A G T C A G T C C G T A G T C A C G A T A G T C C G T A A T C G
A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G T C A A C G T A G C T G T C A T C G A