Information for 6-GTTGTAAATC (Motif 16)

A T C G G C A T G C A T C A T G G A C T C G T A G T C A T G C A C G A T T A G C
Reverse Opposite:
A T C G G C T A A C G T A C G T G C A T C T G A G T A C C G T A C G T A A T G C
p-value:1e-10
log p-value:-2.478e+01
Information Content per bp:1.669
Number of Target Sequences with motif33.0
Percentage of Target Sequences with motif4.53%
Number of Background Sequences with motif520.7
Percentage of Background Sequences with motif1.09%
Average Position of motif in Targets55.7 +/- 22.1bp
Average Position of motif in Background50.3 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CDX4(Homeobox)/ZebrafishEmbryos-Cdx4.Myc-ChIP-Seq(GSE48254)/Homer

Match Rank:1
Score:0.74
Offset:-1
Orientation:forward strand
Alignment:-GTTGTAAATC-
NGYCATAAAWCH
 A C G T A T C G G C A T G C A T C A T G G A C T C G T A G T C A T G C A C G A T T A G C A C G T
T A C G T C A G G A T C G T A C T C G A G A C T G C T A G C T A G C T A C G T A G A T C G T C A

PH0067.1_Hoxc12/Jaspar

Match Rank:2
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----GTTGTAAATC---
TTAGGTCGTAAAATTTC
 A C G T A C G T A C G T A C G T A T C G G C A T G C A T C A T G G A C T C G T A G T C A T G C A C G A T T A G C A C G T A C G T A C G T
G A C T G C A T T C G A T C A G T C A G A G C T G T A C C T A G A C G T G C T A C G T A G C T A G C T A G C A T A G C T C G A T G A T C

PH0065.1_Hoxc10/Jaspar

Match Rank:3
Score:0.73
Offset:-4
Orientation:forward strand
Alignment:----GTTGTAAATC--
TAAAGTCGTAAAACGT
 A C G T A C G T A C G T A C G T A T C G G C A T G C A T C A T G G A C T C G T A G T C A T G C A C G A T T A G C A C G T A C G T
G A C T C G T A C G T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C A T C G A C G T

PH0047.1_Hoxa11/Jaspar

Match Rank:4
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GTTGTAAATC--
TAAAGTCGTAAAACAT
 A C G T A C G T A C G T A C G T A T C G G C A T G C A T C A T G G A C T C G T A G T C A T G C A C G A T T A G C A C G T A C G T
G C A T C T G A G C T A C T G A T C A G A G C T G T A C C T A G A C G T C G T A C G T A G C T A C G T A G A T C C T G A A C G T

PH0077.1_Hoxd12/Jaspar

Match Rank:5
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GTTGTAAATC---
CAAGGTCGTAAAATCTT
 A C G T A C G T A C G T A C G T A T C G G C A T G C A T C A T G G A C T C G T A G T C A T G C A C G A T T A G C A C G T A C G T A C G T
G A C T G C T A C T G A T A C G T C A G A G C T G T A C C T A G A C G T C G T A C G T A C G T A G C T A G A C T G A T C G C A T C A G T

HOXD11/MA0908.1/Jaspar

Match Rank:6
Score:0.72
Offset:0
Orientation:forward strand
Alignment:GTTGTAAATC
GTCGTAAAAA
 A T C G G C A T G C A T C A T G G A C T C G T A G T C A T G C A C G A T T A G C
T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A

Rhox11/MA0629.1/Jaspar

Match Rank:7
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----GTTGTAAATC--
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T A C G T A T C G G C A T G C A T C A T G G A C T C G T A G T C A T G C A C G A T T A G C A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0157.1_Rhox11_1/Jaspar

Match Rank:8
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----GTTGTAAATC--
AAGACGCTGTAAAGCGA
 A C G T A C G T A C G T A C G T A C G T A T C G G C A T G C A T C A T G G A C T C G T A G T C A T G C A C G A T T A G C A C G T A C G T
C G T A T G C A C A T G T G C A G A T C C T A G T A G C C A G T C T A G G A C T C G T A G C T A G C T A C T A G T A G C T C A G G C T A

PH0158.1_Rhox11_2/Jaspar

Match Rank:9
Score:0.72
Offset:-5
Orientation:forward strand
Alignment:-----GTTGTAAATC--
AGGACGCTGTAAAGGGA
 A C G T A C G T A C G T A C G T A C G T A T C G G C A T G C A T C A T G G A C T C G T A G T C A T G C A C G A T T A G C A C G T A C G T
C G T A T C A G C A T G G T C A G A T C C T A G T A G C C A G T C T A G G A C T G C T A C G T A G C T A C T A G T A C G T C A G G C T A

PH0066.1_Hoxc11/Jaspar

Match Rank:10
Score:0.72
Offset:-4
Orientation:forward strand
Alignment:----GTTGTAAATC--
TAAAGTCGTAAAATAG
 A C G T A C G T A C G T A C G T A T C G G C A T G C A T C A T G G A C T C G T A G T C A T G C A C G A T T A G C A C G T A C G T
G A C T C T G A C G T A C T G A T C A G A G C T G A T C C T A G A C G T C G T A C G T A C G T A G C T A G A C T C T G A C A T G