Information for 17-GTGAATAAGC (Motif 35)

A C T G A C G T A C T G C G T A C G T A A G C T C T G A G C T A A C T G A G T C
Reverse Opposite:
A C T G A G T C C G A T A G C T C T G A A C G T A C G T G T A C C G T A A G T C
p-value:1e-5
log p-value:-1.300e+01
Information Content per bp:1.880
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.23%
Number of Background Sequences with motif58.1
Percentage of Background Sequences with motif0.12%
Average Position of motif in Targets58.3 +/- 22.9bp
Average Position of motif in Background48.2 +/- 39.5bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.57
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXK2(Forkhead)/U2OS-FOXK2-ChIP-Seq(E-MTAB-2204)/Homer

Match Rank:1
Score:0.67
Offset:-2
Orientation:reverse strand
Alignment:--GTGAATAAGC
ATGTAAACADGS
 A C G T A C G T A C T G A C G T A C T G C G T A C G T A A G C T C T G A G C T A A C T G A G T C
C G T A C A G T T C A G C G A T G T C A G T C A C G T A A G T C C G T A C G A T A T C G A T G C

Foxa2(Forkhead)/Liver-Foxa2-ChIP-Seq(GSE25694)/Homer

Match Rank:2
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GTGAATAAGC
TATGTAAACANG-
 A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A G C T C T G A G C T A A C T G A G T C
G C A T T C G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C T G A T A C G A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:3
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GTGAATAAGC----
GACGATAATGAGCTTGC
 A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A G C T C T G A G C T A A C T G A G T C A C G T A C G T A C G T A C G T
T A C G G C T A T G A C T A C G G C T A C G A T C G T A C G T A A C G T C A T G C G T A A C T G A T C G G C A T C A G T C T A G G T A C

POU6F2/MA0793.1/Jaspar

Match Rank:4
Score:0.65
Offset:1
Orientation:reverse strand
Alignment:GTGAATAAGC-
-NTAATGAGCT
 A C T G A C G T A C T G C G T A C G T A A G C T C T G A G C T A A C T G A G T C A C G T
A C G T C G T A C G A T T G C A C T G A C A G T C A T G G T C A C T A G A T G C G A C T

Foxa3(Forkhead)/Liver-Foxa3-ChIP-Seq(GSE77670)/Homer

Match Rank:5
Score:0.65
Offset:-5
Orientation:reverse strand
Alignment:-----GTGAATAAGC
NCWRWGTAAACANSV
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A G C T C T G A G C T A A C T G A G T C
T G A C G A T C G C A T C T G A C G A T C T A G A G C T G T C A G T C A C G T A A G T C C G T A C G T A A T C G T C A G

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GTGAATAAGC
ATGMATATDC
 A C T G A C G T A C T G C G T A C G T A A G C T C T G A G C T A A C T G A G T C
G C T A A C G T C T A G G T A C G C T A G A C T C T G A G C A T C A T G G A T C

FOXO3/MA0157.2/Jaspar

Match Rank:7
Score:0.64
Offset:0
Orientation:forward strand
Alignment:GTGAATAAGC
GTAAACAA--
 A C T G A C G T A C T G C G T A C G T A A G C T C T G A G C T A A C T G A G T C
C T A G A C G T T G C A G T C A G T C A G T A C G T C A C G T A A C G T A C G T

PB0015.1_Foxa2_1/Jaspar

Match Rank:8
Score:0.64
Offset:-5
Orientation:forward strand
Alignment:-----GTGAATAAGC--
AAAAAGTAAACAAAGAC
 A C G T A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A G C T C T G A G C T A A C T G A G T C A C G T A C G T
G C T A C G T A G C T A C G T A C G T A C T A G A G C T G T C A G T C A C G T A A G T C C G T A G C T A C G T A T A C G C T G A A G T C

PH0168.1_Hnf1b/Jaspar

Match Rank:9
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GTGAATAAGC---
AGCTGTTAACTAGCCGT
 A C G T A C G T A C G T A C G T A C T G A C G T A C T G C G T A C G T A A G C T C T G A G C T A A C T G A G T C A C G T A C G T A C G T
C G T A A C T G A G T C A C G T C T A G G C A T G A C T C G T A G C T A A G T C A G C T C G T A T C A G A G T C G A T C A T C G A G C T

LBX1/MA0618.1/Jaspar

Match Rank:10
Score:0.63
Offset:1
Orientation:forward strand
Alignment:GTGAATAAGC
-TTAATTAG-
 A C T G A C G T A C T G C G T A C G T A A G C T C T G A G C T A A C T G A G T C
A C G T C G A T A G C T C G T A C G T A A G C T C G A T C T G A A T C G A C G T