Information for 12-GGGGAATTCT (Motif 28)

C T A G A T C G C T A G A C T G C G T A G C T A G A C T A G C T G T A C C G A T
Reverse Opposite:
C G T A C A T G T C G A C T G A C G A T G C A T T G A C A G T C T A G C A G T C
p-value:1e-8
log p-value:-1.945e+01
Information Content per bp:1.729
Number of Target Sequences with motif18.0
Percentage of Target Sequences with motif2.76%
Number of Background Sequences with motif216.4
Percentage of Background Sequences with motif0.47%
Average Position of motif in Targets42.7 +/- 25.7bp
Average Position of motif in Background52.0 +/- 28.1bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MF0003.1_REL_class/Jaspar

Match Rank:1
Score:0.73
Offset:0
Orientation:forward strand
Alignment:GGGGAATTCT
GGGGATTTCC
 C T A G A T C G C T A G A C T G C G T A G C T A G A C T A G C T G T A C C G A T
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:2
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGGGAATTCT-
NGGGGATTTCCC
 A C G T C T A G A T C G C T A G A C T G C G T A G C T A G A C T A G C T G T A C C G A T A C G T
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C

MZF1/MA0056.1/Jaspar

Match Rank:3
Score:0.72
Offset:-1
Orientation:forward strand
Alignment:-GGGGAATTCT
TGGGGA-----
 A C G T C T A G A T C G C T A G A C T G C G T A G C T A G A C T A G C T G T A C C G A T
A G C T A C T G C T A G A C T G A C T G C T G A A C G T A C G T A C G T A C G T A C G T

NFKB2/MA0778.1/Jaspar

Match Rank:4
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GGGGAATTCT--
AGGGGAATCCCCT
 A C G T C T A G A T C G C T A G A C T G C G T A G C T A G A C T A G C T G T A C C G A T A C G T A C G T
T C G A C T A G C A T G C A T G C T A G C T G A C G T A A C G T G A T C G T A C G T A C A G T C A C G T

NFKB1/MA0105.4/Jaspar

Match Rank:5
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGGGAATTCT--
AGGGGAATCCCCT
 A C G T C T A G A T C G C T A G A C T G C G T A G C T A G A C T A G C T G T A C C G A T A C G T A C G T
T G C A C T A G A T C G C A T G C T A G T C G A C G T A A G C T G A T C G T A C G T A C G A T C A C G T

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:6
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGGGAATTCT-
GGGGGAATCCCC
 A C G T C T A G A T C G C T A G A C T G C G T A G C T A G A C T A G C T G T A C C G A T A C G T
T C A G C T A G C T A G C T A G T C A G T C G A C T G A C G A T A G T C G A T C A G T C T G A C

REL/MA0101.1/Jaspar

Match Rank:7
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGGGAATTCT
GGGGATTTCC
 C T A G A T C G C T A G A C T G C G T A G C T A G A C T A G C T G T A C C G A T
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C

PB0204.1_Zfp740_2/Jaspar

Match Rank:8
Score:0.65
Offset:-8
Orientation:reverse strand
Alignment:--------GGGGAATTCT
ANTNCCGGGGGGAANTT-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T C G C T A G A C T G C G T A G C T A G A C T A G C T G T A C C G A T
C T G A A G T C G A C T G A C T T A G C A T G C T A C G T A C G A C T G C T A G C T A G C T A G C G T A G T C A G A C T G A C T G A C T A C G T

PB0201.1_Zfp281_2/Jaspar

Match Rank:9
Score:0.65
Offset:-7
Orientation:reverse strand
Alignment:-------GGGGAATTCT
NNNATTGGGGGTNTCCT
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A T C G C T A G A C T G C G T A G C T A G A C T A G C T G T A C C G A T
A G T C G C T A G C T A G C T A C G A T C G A T A C T G A C T G A C T G C A T G A C T G A G C T G T A C G C A T G T A C G T A C G C A T

RELA/MA0107.1/Jaspar

Match Rank:10
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GGGGAATTCT
GGGAATTTCC
 C T A G A T C G C T A G A C T G C G T A G C T A G A C T A G C T G T A C C G A T
A T C G A C T G A C T G C T G A T C G A C G A T A C G T A G C T A G T C A G T C