Information for 19-ATCCCTCCAGAGCACC (Motif 26)

C G T A A G C T A G T C A T G C A G T C A C G T A T G C A G T C C G T A A C T G C G T A A T C G G T A C C T G A A G T C A G T C
Reverse Opposite:
A C T G A C T G A G C T A C T G A T G C A C G T A G T C A C G T A C T G A T C G C G T A A C T G A T C G C T A G C T G A A C G T
p-value:1e-8
log p-value:-2.026e+01
Information Content per bp:1.851
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.61%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.8 +/- 24.6bp
Average Position of motif in Background78.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.25
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.55
Offset:6
Orientation:reverse strand
Alignment:ATCCCTCCAGAGCACC
------CCAGACRSVB
 C G T A A G C T A G T C A T G C A G T C A C G T A T G C A G T C C G T A A C T G C G T A A T C G G T A C C T G A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:2
Score:0.54
Offset:4
Orientation:forward strand
Alignment:ATCCCTCCAGAGCACC-----
----CATAAGACCACCATTAC
 C G T A A G C T A G T C A T G C A G T C A C G T A T G C A G T C C G T A A C T G C G T A A T C G G T A C C T G A A G T C A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C C G A T C A G T C T G A T G C A A C T G G T C A G A T C A T G C G T C A G A T C G A T C G C T A A C G T C A G T C T G A A G C T

BCL6B/MA0731.1/Jaspar

Match Rank:3
Score:0.53
Offset:-3
Orientation:reverse strand
Alignment:---ATCCCTCCAGAGCACC
TGAATTCCTAGAAAGCA--
 A C G T A C G T A C G T C G T A A G C T A G T C A T G C A G T C A C G T A T G C A G T C C G T A A C T G C G T A A T C G G T A C C T G A A G T C A G T C
A C G T A C T G C T G A C T G A A C G T A G C T A G T C A G T C A C G T T G C A A C T G G T C A C G T A C G T A C T A G G A T C C T G A A C G T A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.52
Offset:6
Orientation:reverse strand
Alignment:ATCCCTCCAGAGCACC
------CCAGACAG--
 C G T A A G C T A G T C A T G C A G T C A C G T A T G C A G T C C G T A A C T G C G T A A T C G G T A C C T G A A G T C A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:5
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--ATCCCTCCAGAGCACC
GGCCYCCTGCTGDGH---
 A C G T A C G T C G T A A G C T A G T C A T G C A G T C A C G T A T G C A G T C C G T A A C T G C G T A A T C G G T A C C T G A A G T C A G T C
C A T G T A C G T A G C G A T C G A T C A T G C G T A C G A C T T C A G A T G C C G A T A T C G C A G T A C T G G T A C A C G T A C G T A C G T

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.51
Offset:0
Orientation:reverse strand
Alignment:ATCCCTCCAGAGCACC
CCCCCTGCTGTG----
 C G T A A G C T A G T C A T G C A G T C A C G T A T G C A G T C C G T A A C T G C G T A A T C G G T A C C T G A A G T C A G T C
G A T C G A T C G A T C G T A C G T A C G C A T C T A G A G T C G C A T A C T G C G A T A C T G A C G T A C G T A C G T A C G T

Hand1::Tcf3/MA0092.1/Jaspar

Match Rank:7
Score:0.51
Offset:3
Orientation:reverse strand
Alignment:ATCCCTCCAGAGCACC
---ATGCCAGACN---
 C G T A A G C T A G T C A T G C A G T C A C G T A T G C A G T C C G T A A C T G C G T A A T C G G T A C C T G A A G T C A G T C
A C G T A C G T A C G T C G T A G C A T C A T G T A G C A G T C C G T A C T A G C G T A G A T C T A G C A C G T A C G T A C G T

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:8
Score:0.50
Offset:3
Orientation:forward strand
Alignment:ATCCCTCCAGAGCACC
---CCTGCTGAGH---
 C G T A A G C T A G T C A T G C A G T C A C G T A T G C A G T C C G T A A C T G C G T A A T C G G T A C C T G A A G T C A G T C
A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T A C G T A C G T

Bcl6/MA0463.1/Jaspar

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:ATCCCTCCAGAGCACC
TTTCCTAGAAAGCA--
 C G T A A G C T A G T C A T G C A G T C A C G T A T G C A G T C C G T A A C T G C G T A A T C G G T A C C T G A A G T C A G T C
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A A C G T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:10
Score:0.48
Offset:-3
Orientation:reverse strand
Alignment:---ATCCCTCCAGAGCACC
NNNATTCCTCGAAAGN---
 A C G T A C G T A C G T C G T A A G C T A G T C A T G C A G T C A C G T A T G C A G T C C G T A A C T G C G T A A T C G G T A C C T G A A G T C A G T C
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A A C G T A C G T A C G T