Information for 10-AAGAGACCTGACA (Motif 21)

C G T A C T G A A C T G C G T A C T A G C G T A A G T C A G T C A C G T C T A G C T G A A G T C C G T A
Reverse Opposite:
C G A T A C T G A G C T A G T C C G T A A C T G A C T G A C G T A G T C A C G T A G T C A G C T A C G T
p-value:1e-9
log p-value:-2.269e+01
Information Content per bp:1.931
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.77%
Number of Background Sequences with motif2.5
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets36.4 +/- 27.9bp
Average Position of motif in Background27.4 +/- 4.5bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0140.1_Pknox1/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:forward strand
Alignment:AAGAGACCTGACA----
-AAAGACCTGTCAATCC
 C G T A C T G A A C T G C G T A C T A G C G T A A G T C A G T C A C G T C T A G C T G A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C G T A C T G A T G C A A T C G C T G A A T G C T G A C A G C T C T A G G C A T A G T C C G T A G C T A G C A T T G A C T G A C

PKNOX2/MA0783.1/Jaspar

Match Rank:2
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:AAGAGACCTGACA
-TGACACCTGTCA
 C G T A C T G A A C T G C G T A C T A G C G T A A G T C A G T C A C G T C T A G C T G A A G T C C G T A
A C G T G A C T A C T G C T G A A G T C C T G A A T G C G T A C G C A T C T A G G A C T A T G C G C T A

Six1(Homeobox)/Myoblast-Six1-ChIP-Chip(GSE20150)/Homer

Match Rank:3
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:AAGAGACCTGACA-
--GWAAYHTGABMC
 C G T A C T G A A C T G C G T A C T A G C G T A A G T C A G T C A C G T C T A G C T G A A G T C C G T A A C G T
A C G T A C G T A C T G C G A T G T C A C G T A A G T C G T A C G C A T A C T G C G T A A C G T G T A C G A T C

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:4
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:AAGAGACCTGACA
-----ARNTGACA
 C G T A C T G A A C T G C G T A C T A G C G T A A G T C A G T C A C G T C T A G C T G A A G T C C G T A
A C G T A C G T A C G T A C G T A C G T T G C A C T A G G A T C A C G T C T A G C G T A G T A C T C G A

PKNOX1/MA0782.1/Jaspar

Match Rank:5
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AAGAGACCTGACA
-TGACACCTGTCA
 C G T A C T G A A C T G C G T A C T A G C G T A A G T C A G T C A C G T C T A G C T G A A G T C C G T A
A C G T G C A T A T C G C G T A A G T C T C G A A T G C G T A C G A C T C A T G G A C T A T G C C T G A

PRDM14(Zf)/H1-PRDM14-ChIP-Seq(GSE22767)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---AAGAGACCTGACA
GGTTAGAGACCT----
 A C G T A C G T A C G T C G T A C T G A A C T G C G T A C T A G C G T A A G T C A G T C A C G T C T A G C T G A A G T C C G T A
C T A G T A C G C G A T A C G T C G T A T C A G C T G A T C A G G T C A T G A C A G T C G A C T A C G T A C G T A C G T A C G T

PH0104.1_Meis2/Jaspar

Match Rank:7
Score:0.60
Offset:1
Orientation:forward strand
Alignment:AAGAGACCTGACA----
-AAAGACCTGTCAATAC
 C G T A C T G A A C T G C G T A C T A G C G T A A G T C A G T C A C G T C T A G C T G A A G T C C G T A A C G T A C G T A C G T A C G T
A C G T G C T A C G T A T C A G A T C G C T G A A T G C G T A C A G C T C T A G C G A T A G T C C G T A G C T A C G A T G T C A A G T C

Six2(Homeobox)/NephronProgenitor-Six2-ChIP-Seq(GSE39837)/Homer

Match Rank:8
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AAGAGACCTGACA-
--GWAAYHTGAKMC
 C G T A C T G A A C T G C G T A C T A G C G T A A G T C A G T C A C G T C T A G C T G A A G T C C G T A A C G T
A C G T A C G T C T A G C G T A G T C A C G T A A G T C G A T C A G C T C T A G C G T A A C G T G T C A G A T C

Meis1(Homeobox)/MastCells-Meis1-ChIP-Seq(GSE48085)/Homer

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:AAGAGACCTGACA--
-----VGCTGWCAVB
 C G T A C T G A A C T G C G T A C T A G C G T A A G T C A G T C A C G T C T A G C T G A A G T C C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T A C G T A G C A C G T A C T G C G A T A G T C C G T A T A C G A G T C

MEIS1/MA0498.2/Jaspar

Match Rank:10
Score:0.59
Offset:7
Orientation:forward strand
Alignment:AAGAGACCTGACA-
-------TTGACAG
 C G T A C T G A A C T G C G T A C T A G C G T A A G T C A G T C A C G T C T A G C T G A A G T C C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G