Information for 1-HWDAAATCACWGC (Motif 1)

G C A T C G T A C A T G G T C A G T C A C G T A A C G T A G T C G C T A T A G C C G T A C T A G G T A C
Reverse Opposite:
C A T G G A T C G C A T A T C G C G A T A C T G C G T A A C G T A C G T C A G T G T A C G C A T C G T A
p-value:1e-99
log p-value:-2.287e+02
Information Content per bp:1.643
Number of Target Sequences with motif154.0
Percentage of Target Sequences with motif23.58%
Number of Background Sequences with motif1151.9
Percentage of Background Sequences with motif2.48%
Average Position of motif in Targets51.6 +/- 24.3bp
Average Position of motif in Background49.8 +/- 32.0bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b/MA0483.1/Jaspar

Match Rank:1
Score:0.94
Offset:3
Orientation:forward strand
Alignment:HWDAAATCACWGC-
---AAATCACAGCA
 G C A T C G T A C A T G G T C A G T C A C G T A A C G T A G T C G C T A T A G C C G T A C T A G G T A C A C G T
A C G T A C G T A C G T T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

Gfi1/MA0038.1/Jaspar

Match Rank:2
Score:0.93
Offset:2
Orientation:forward strand
Alignment:HWDAAATCACWGC
--CAAATCACTG-
 G C A T C G T A C A T G G T C A G T C A C G T A A C G T A G T C G C T A T A G C C G T A C T A G G T A C
A C G T A C G T A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.92
Offset:3
Orientation:forward strand
Alignment:HWDAAATCACWGC
---AAATCACTGC
 G C A T C G T A C A T G G T C A G T C A C G T A A C G T A G T C G C T A T A G C C G T A C T A G G T A C
A C G T A C G T A C G T T G C A C G T A G T C A A G C T A G T C G C T A T A G C C G A T C T A G G A T C

PH0037.1_Hdx/Jaspar

Match Rank:4
Score:0.80
Offset:-3
Orientation:forward strand
Alignment:---HWDAAATCACWGC-
AAGGCGAAATCATCGCA
 A C G T A C G T A C G T G C A T C G T A C A T G G T C A G T C A C G T A A C G T A G T C G C T A T A G C C G T A C T A G G T A C A C G T
C G T A C T G A A C T G C A T G G T A C C T A G T G C A C G T A C G T A A C G T A T G C G C T A G A C T G A T C A T C G G T A C T G C A

Hoxc9/MA0485.1/Jaspar

Match Rank:5
Score:0.75
Offset:-3
Orientation:forward strand
Alignment:---HWDAAATCACWGC
GGCCATAAATCAC---
 A C G T A C G T A C G T G C A T C G T A C A T G G T C A G T C A C G T A A C G T A G T C G C T A T A G C C G T A C T A G G T A C
C T A G T A C G G A T C G T A C C T G A A G C T T G C A C G T A G T C A C G A T G A T C G C T A A G T C A C G T A C G T A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:6
Score:0.73
Offset:-2
Orientation:forward strand
Alignment:--HWDAAATCACWGC
GCCATAAATCA----
 A C G T A C G T G C A T C G T A C A T G G T C A G T C A C G T A A C G T A G T C G C T A T A G C C G T A C T A G G T A C
T A C G G A T C G T A C T C G A A C G T T G C A G C T A G T C A C G A T G A T C G C T A A C G T A C G T A C G T A C G T

Hoxc9(Homeobox)/Ainv15-Hoxc9-ChIP-Seq(GSE21812)/Homer

Match Rank:7
Score:0.72
Offset:-3
Orientation:forward strand
Alignment:---HWDAAATCACWGC
GGCCATAAATCA----
 A C G T A C G T A C G T G C A T C G T A C A T G G T C A G T C A C G T A A C G T A G T C G C T A T A G C C G T A C T A G G T A C
C T A G T A C G G A T C G T A C C T G A A G C T T G C A G C T A C G T A G C A T G A T C G C T A A C G T A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:8
Score:0.72
Offset:2
Orientation:forward strand
Alignment:HWDAAATCACWGC
--CCAATCAA---
 G C A T C G T A C A T G G T C A G T C A C G T A A C G T A G T C G C T A T A G C C G T A C T A G G T A C
A C G T A C G T A T G C A G T C C G T A C G T A A C G T A G T C C G T A C G T A A C G T A C G T A C G T

HOXA9(Homeobox)/HSC-Hoxa9-ChIP-Seq(GSE33509)/Homer

Match Rank:9
Score:0.70
Offset:-3
Orientation:forward strand
Alignment:---HWDAAATCACWGC
GGCCATAAATCA----
 A C G T A C G T A C G T G C A T C G T A C A T G G T C A G T C A C G T A A C G T A G T C G C T A T A G C C G T A C T A G G T A C
C T A G T A C G A G T C G T A C T C G A A C G T G T C A G C T A G C T A C G A T A G T C G C T A A C G T A C G T A C G T A C G T

Pdx1(Homeobox)/Islet-Pdx1-ChIP-Seq(SRA008281)/Homer

Match Rank:10
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-HWDAAATCACWGC
TCATCAATCA----
 A C G T G C A T C G T A C A T G G T C A G T C A C G T A A C G T A G T C G C T A T A G C C G T A C T A G G T A C
G A C T G T A C T G C A A C G T G A T C G C T A T C G A A C G T A G T C C G T A A C G T A C G T A C G T A C G T