Information for 2-CGCCTKCGCCCGC (Motif 4)

T A G C A T C G A G T C G A T C A C G T A C G T G A T C C T A G G T A C A G T C G A T C A C T G A T G C
Reverse Opposite:
T A C G T G A C C T A G C T A G A C T G G A T C C A T G T G C A T G C A C A T G A C T G A T G C A T C G
p-value:1e-12
log p-value:-2.843e+01
Information Content per bp:1.703
Number of Target Sequences with motif26.0
Percentage of Target Sequences with motif5.49%
Number of Background Sequences with motif415.8
Percentage of Background Sequences with motif0.89%
Average Position of motif in Targets55.2 +/- 25.4bp
Average Position of motif in Background50.8 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:forward strand
Alignment:-CGCCTKCGCCCGC
GCGCCTGCGCA---
 A C G T T A G C A T C G A G T C G A T C A C G T A C G T G A T C C T A G G T A C A G T C G A T C A C T G A T G C
T C A G G T A C T C A G A T G C T G A C A C G T A C T G A G T C A T C G G T A C T C G A A C G T A C G T A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:2
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:CGCCTKCGCCCGC--
TGCCTGCGYCMCCTT
 T A G C A T C G A G T C G A T C A C G T A C G T G A T C C T A G G T A C A G T C G A T C A C T G A T G C A C G T A C G T
C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.64
Offset:-3
Orientation:forward strand
Alignment:---CGCCTKCGCCCGC
CTGCGCATGCGC----
 A C G T A C G T A C G T T A G C A T C G A G T C G A T C A C G T A C G T G A T C C T A G G T A C A G T C G A T C A C T G A T G C
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T A C G T A C G T A C G T

NRF(NRF)/Promoter/Homer

Match Rank:4
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CGCCTKCGCCCGC
GTGCGCATGCGC----
 A C G T A C G T A C G T T A G C A T C G A G T C G A T C A C G T A C G T G A T C C T A G G T A C A G T C G A T C A C T G A T G C
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T A C G T

ZSCAN22(Zf)/HEK293-ZSCAN22.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:5
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:CGCCTKCGCCCGC--------
-GCCTCCTCCMTCWGACTGKS
 T A G C A T C G A G T C G A T C A C G T A C G T G A T C C T A G G T A C A G T C G A T C A C T G A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T T A C G G A T C G A T C G A C T A G T C A G T C G C A T A G T C A G T C G T A C A G C T A G T C G C T A T C A G C T G A A G T C G A C T T A C G A C T G T A G C

EGR1/MA0162.2/Jaspar

Match Rank:6
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CGCCTKCGCCCGC
CCCCCGCCCCCGCC---
 A C G T A C G T A C G T A C G T T A G C A T C G A G T C G A T C A C G T A C G T G A T C C T A G G T A C A G T C G A T C A C T G A T G C
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGCCTKCGCCCGC
ACGCCCACGCA---
 A C G T T A G C A T C G A G T C G A T C A C G T A C G T G A T C C T A G G T A C A G T C G A T C A C T G A T G C
G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T A C G T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:8
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---CGCCTKCGCCCGC
CTACGCCCACGCACT-
 A C G T A C G T A C G T T A G C A T C G A G T C G A T C A C G T A C G T G A T C C T A G G T A C A G T C G A T C A C T G A T G C
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T A C G T

PB0010.1_Egr1_1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--CGCCTKCGCCCGC
TCCGCCCCCGCATT-
 A C G T A C G T T A G C A T C G A G T C G A T C A C G T A C G T G A T C C T A G G T A C A G T C G A T C A C T G A T G C
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:CGCCTKCGCCCGC-
--GCTCCGCCCMCY
 T A G C A T C G A G T C G A T C A C G T A C G T G A T C C T A G G T A C A G T C G A T C A C T G A T G C A C G T
A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T