Information for 1-GCTTCGCCACGAA (Motif 2)

A C T G A G T C A G C T A C G T A G T C T C A G A G T C A G T C C G T A A G T C A T C G G T C A C T G A
Reverse Opposite:
A G C T A C G T A T G C C T A G A C G T A C T G A C T G A G T C A C T G G T C A C T G A A C T G A G T C
p-value:1e-13
log p-value:-3.002e+01
Information Content per bp:1.840
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif1.27%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.3 +/- 28.8bp
Average Position of motif in Background45.5 +/- 11.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sp1(Zf)/Promoter/Homer

Match Rank:1
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-GCTTCGCCACGAA
GGCCCCGCCCCC--
 A C G T A C T G A G T C A G C T A C G T A G T C T C A G A G T C A G T C C G T A A G T C A T C G G T C A C T G A
T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:2
Score:0.59
Offset:4
Orientation:forward strand
Alignment:GCTTCGCCACGAA
----ATCCAC---
 A C T G A G T C A G C T A C G T A G T C T C A G A G T C A G T C C G T A A G T C A T C G G T C A C T G A
A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:3
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GCTTCGCCACGAA
GCTCCGCCCMCY-
 A C T G A G T C A G C T A C G T A G T C T C A G A G T C A G T C C G T A A G T C A T C G G T C A C T G A
C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T A C G T

POL008.1_DCE_S_I/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCTTCGCCACGAA
GCTTCC-------
 A C T G A G T C A G C T A C G T A G T C T C A G A G T C A G T C C G T A A G T C A T C G G T C A C T G A
A C T G A T G C A G C T A C G T A T G C A T G C A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:5
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:GCTTCGCCACGAA
-------CACGCA
 A C T G A G T C A G C T A C G T A G T C T C A G A G T C A G T C C G T A A G T C A T C G G T C A C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

PB0164.1_Smad3_2/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---GCTTCGCCACGAA-
TACGCCCCGCCACTCTG
 A C G T A C G T A C G T A C T G A G T C A G C T A C G T A G T C T C A G A G T C A G T C C G T A A G T C A T C G G T C A C T G A A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

POL003.1_GC-box/Jaspar

Match Rank:7
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--GCTTCGCCACGAA
NAGCCCCGCCCCCN-
 A C G T A C G T A C T G A G T C A G C T A C G T A G T C T C A G A G T C A G T C C G T A A G T C A T C G G T C A C T G A
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T A C G T

KLF6(Zf)/PDAC-KLF6-ChIP-Seq(GSE64557)/Homer

Match Rank:8
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-GCTTCGCCACGAA
GGCCACRCCCMK--
 A C G T A C T G A G T C A G C T A C G T A G T C T C A G A G T C A G T C C G T A A G T C A T C G G T C A C T G A
C T A G C T A G T G A C G T A C T G C A A G T C C T A G A G T C A G T C A G T C G T C A C A T G A C G T A C G T

KLF3(Zf)/MEF-Klf3-ChIP-Seq(GSE44748)/Homer

Match Rank:9
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCTTCGCCACGAA
NRGCCCCRCCCHBNN
 A C G T A C G T A C T G A G T C A G C T A C G T A G T C T C A G A G T C A G T C C G T A A G T C A T C G G T C A C T G A
G A C T T C A G C T A G A G T C A G T C G T A C A G T C C T G A A G T C A G T C A G T C G A C T A G T C A C T G A T G C

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:10
Score:0.55
Offset:-2
Orientation:forward strand
Alignment:--GCTTCGCCACGAA
CCGCATAGCAACGGA
 A C G T A C G T A C T G A G T C A G C T A C G T A G T C T C A G A G T C A G T C C G T A A G T C A T C G G T C A C T G A
A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A