Information for 1-CYGACCACAVGCTGGC (Motif 1)

T A G C A G C T C A T G C T G A A G T C T A G C T G C A A T G C G C T A T G C A A C T G T A G C C A G T A C T G A C T G G T A C
Reverse Opposite:
C A T G A G T C A G T C G T C A A T C G A G T C A C G T C G A T A T C G A C G T A C T G A C T G A G C T G T A C C T G A A T C G
p-value:1e-18
log p-value:-4.327e+01
Information Content per bp:1.675
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif2.95%
Number of Background Sequences with motif28.6
Percentage of Background Sequences with motif0.06%
Average Position of motif in Targets43.8 +/- 27.6bp
Average Position of motif in Background56.4 +/- 27.9bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CYGACCACAVGCTGGC-----
-TGGCCACCAGGTGGCACTNT
 T A G C A G C T C A T G C T G A A G T C T A G C T G C A A T G C G C T A T G C A A C T G T A G C C A G T A C T G A C T G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.73
Offset:1
Orientation:forward strand
Alignment:CYGACCACAVGCTGGC----
-TGGCCACCAGGGGGCGCTA
 T A G C A G C T C A T G C T G A A G T C T A G C T G C A A T G C G C T A T G C A A C T G T A G C C A G T A C T G A C T G G T A C A C G T A C G T A C G T A C G T
A C G T G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:3
Score:0.70
Offset:3
Orientation:reverse strand
Alignment:CYGACCACAVGCTGGC-------
---GCCASCAGGGGGCGCYVNNG
 T A G C A G C T C A T G C T G A A G T C T A G C T G C A A T G C G C T A T G C A A C T G T A G C C A G T A C T G A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T C T A G T A G C A G T C C G T A T A G C G A T C C G T A A C T G C T A G C A T G A C T G A C T G G T A C C T A G A T G C G A T C T C A G A C T G T C A G A T C G

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CYGACCACAVGCTGGC
NWAACCACADNN----
 T A G C A G C T C A T G C T G A A G T C T A G C T G C A A T G C G C T A T G C A A C T G T A G C C A G T A C T G A C T G G T A C
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:5
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CYGACCACAVGCTGGC
NAAACCACAG------
 T A G C A G C T C A T G C T G A A G T C T A G C T G C A A T G C G C T A T G C A A C T G T A G C C A G T A C T G A C T G G T A C
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:CYGACCACAVGCTGGC
--CACCCCCGGGGGGG
 T A G C A G C T C A T G C T G A A G T C T A G C T G C A A T G C G C T A T G C A A C T G T A G C C A G T A C T G A C T G G T A C
A C G T A C G T A T G C G T C A G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G A C T G A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CYGACCACAVGCTGGC
-AAACCACAGAN----
 T A G C A G C T C A T G C T G A A G T C T A G C T G C A A T G C G C T A T G C A A C T G T A G C C A G T A C T G A C T G G T A C
A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:CYGACCACAVGCTGGC
-AAACCACAGC-----
 T A G C A G C T C A T G C T G A A G T C T A G C T G C A A T G C G C T A T G C A A C T G T A G C C A G T A C T G A C T G G T A C
A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CYGACCACAVGCTGGC
-AAACCGCAA------
 T A G C A G C T C A T G C T G A A G T C T A G C T G C A A T G C G C T A T G C A A C T G T A G C C A G T A C T G A C T G G T A C
A C G T G C T A C T G A G T C A A G T C A G T C C T A G A G T C T G C A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

ZIC4/MA0751.1/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:forward strand
Alignment:CYGACCACAVGCTGGC-
--GACCCCCCGCTGTGC
 T A G C A G C T C A T G C T G A A G T C T A G C T G C A A T G C G C T A T G C A A C T G T A G C C A G T A C T G A C T G G T A C A C G T
A C G T A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C