Information for 8-GATGAAMGCAGAA (Motif 7)

A C T G C G T A A C G T A C T G C G T A C G T A T G A C T A C G A G T C C G T A A C T G C T G A C G T A
Reverse Opposite:
C G A T A G C T G T A C A C G T A C T G A T G C A C T G A C G T A C G T G T A C C G T A A C G T A G T C
p-value:1e-12
log p-value:-2.843e+01
Information Content per bp:1.840
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif7.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets55.9 +/- 25.1bp
Average Position of motif in Background44.9 +/- 16.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

OTX2/MA0712.1/Jaspar

Match Rank:1
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GATGAAMGCAGAA
NGGATTAA-------
 A C G T A C G T A C T G C G T A A C G T A C T G C G T A C G T A T G A C T A C G A G T C C G T A A C T G C T G A C G T A
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Arid3a/MA0151.1/Jaspar

Match Rank:2
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GATGAAMGCAGAA
-ATTAAA------
 A C T G C G T A A C G T A C T G C G T A C G T A T G A C T A C G A G T C C G T A A C T G C T G A C G T A
A C G T C G T A A C G T G A C T C G T A C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:3
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GATGAAMGCAGAA
GGGATTAA-------
 A C G T A C G T A C T G C G T A A C G T A C T G C G T A C G T A T G A C T A C G A G T C C G T A A C T G C T G A C G T A
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

OTX1/MA0711.1/Jaspar

Match Rank:4
Score:0.59
Offset:-2
Orientation:reverse strand
Alignment:--GATGAAMGCAGAA
CGGATTAN-------
 A C G T A C G T A C T G C G T A A C G T A C T G C G T A C G T A T G A C T A C G A G T C C G T A A C T G C T G A C G T A
T A G C T A C G A T C G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0084.1_Tcf7l2_1/Jaspar

Match Rank:5
Score:0.59
Offset:-4
Orientation:reverse strand
Alignment:----GATGAAMGCAGAA
NNNAGATCAAAGGANNN
 A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G C G T A C G T A T G A C T A C G A G T C C G T A A C T G C T G A C G T A
A C G T G C T A G C A T C G T A A T C G C G T A C G A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C T A G C A T

PB0083.1_Tcf7_1/Jaspar

Match Rank:6
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GATGAAMGCAGAA
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G C G T A C G T A T G A C T A C G A G T C C G T A A C T G C T G A C G T A
A C G T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G T C A G C A T G C T A

PB0082.1_Tcf3_1/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----GATGAAMGCAGAA
TATAGATCAAAGGAAAA
 A C G T A C G T A C G T A C G T A C T G C G T A A C G T A C T G C G T A C G T A T G A C T A C G A G T C C G T A A C T G C T G A C G T A
G A C T G C T A G C A T C G T A A T C G C G T A G C A T T A G C C G T A C G T A C G T A T C A G T C A G T C G A G C T A G C T A G C T A

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--GATGAAMGCAGAA
RGGATTAR-------
 A C G T A C G T A C T G C G T A A C G T A C T G C G T A C G T A T G A C T A C G A G T C C G T A A C T G C T G A C G T A
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:9
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---GATGAAMGCAGAA
VRGGATTARN------
 A C G T A C G T A C G T A C T G C G T A A C G T A C T G C G T A C G T A T G A C T A C G A G T C C G T A A C T G C T G A C G T A
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GATGAAMGCAGAA
GNGGATTAGN------
 A C G T A C G T A C G T A C T G C G T A A C G T A C T G C G T A C G T A T G A C T A C G A G T C C G T A A C T G C T G A C G T A
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T A C G T A C G T A C G T A C G T