Information for 21-ATAGCAATTAGCCTCT (Motif 36)

C G T A A C G T C G T A A C T G A G T C C G T A C G T A A C G T A C G T C G T A A C T G A G T C A G T C A C G T A G T C A C G T
Reverse Opposite:
C G T A A C T G C G T A A C T G A C T G A G T C A C G T C G T A C G T A A C G T A C G T A C T G A G T C A C G T C G T A A C G T
p-value:1e-5
log p-value:-1.221e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif2.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets35.3 +/- 27.3bp
Average Position of motif in Background32.1 +/- 15.7bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

GBX2/MA0890.1/Jaspar

Match Rank:1
Score:0.64
Offset:2
Orientation:forward strand
Alignment:ATAGCAATTAGCCTCT
--ACCAATTAGC----
 C G T A A C G T C G T A A C T G A G T C C G T A C G T A A C G T A C G T C G T A A C T G A G T C A G T C A C G T A G T C A C G T
A C G T A C G T T C G A A T G C G A T C T C G A T G C A A C G T A C G T G C T A T C A G A T G C A C G T A C G T A C G T A C G T

GBX1/MA0889.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:ATAGCAATTAGCCTCT
--ACTAATTAGC----
 C G T A A C G T C G T A A C T G A G T C C G T A C G T A A C G T A C G T C G T A A C T G A G T C A G T C A C G T A G T C A C G T
A C G T A C G T T C G A A T G C G A C T T C G A T G C A G A C T G A C T G C T A T A C G A G T C A C G T A C G T A C G T A C G T

Barhl1/MA0877.1/Jaspar

Match Rank:3
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ATAGCAATTAGCCTCT
--NNCAATTANN----
 C G T A A C G T C G T A A C T G A G T C C G T A C G T A A C G T A C G T C G T A A C T G A G T C A G T C A C G T A G T C A C G T
A C G T A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T

Isl1(Homeobox)/Neuron-Isl1-ChIP-Seq(GSE31456)/Homer

Match Rank:4
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:ATAGCAATTAGCCTCT
---BCMATTAG-----
 C G T A A C G T C G T A A C T G A G T C C G T A C G T A A C G T A C G T C G T A A C T G A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A C T G A G T C G T C A G T C A A C G T A G C T C G T A T C A G A C G T A C G T A C G T A C G T A C G T

EN2/MA0642.1/Jaspar

Match Rank:5
Score:0.62
Offset:2
Orientation:forward strand
Alignment:ATAGCAATTAGCCTCT
--CCCAATTAGC----
 C G T A A C G T C G T A A C T G A G T C C G T A C G T A A C G T A C G T C G T A A C T G A G T C A G T C A C G T A G T C A C G T
A C G T A C G T T A G C A T G C A G T C T G C A T G C A A C G T A G C T C T G A T A C G A T G C A C G T A C G T A C G T A C G T

VENTX/MA0724.1/Jaspar

Match Rank:6
Score:0.61
Offset:2
Orientation:forward strand
Alignment:ATAGCAATTAGCCTCT
--ACCGATTAG-----
 C G T A A C G T C G T A A C T G A G T C C G T A C G T A A C G T A C G T C G T A A C T G A G T C A G T C A C G T A G T C A C G T
A C G T A C G T C G T A T G A C G A T C T C A G G T C A A C G T A C G T C G T A C T A G A C G T A C G T A C G T A C G T A C G T

Nobox/MA0125.1/Jaspar

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATAGCAATTAGCCTCT
--ACCAATTA------
 C G T A A C G T C G T A A C T G A G T C C G T A C G T A A C G T A C G T C G T A A C T G A G T C A G T C A C G T A G T C A C G T
A C G T A C G T T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T

Msx3/MA0709.1/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:ATAGCAATTAGCCTCT
---CCAATTAA-----
 C G T A A C G T C G T A A C T G A G T C C G T A C G T A A C G T A C G T C G T A A C T G A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A A C G T A C G T A C G T A C G T A C G T

HESX1/MA0894.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:ATAGCAATTAGCCTCT
--NCCAATTANC----
 C G T A A C G T C G T A A C T G A G T C C G T A C G T A A C G T A C G T C G T A A C T G A G T C A G T C A C G T A G T C A C G T
A C G T A C G T C T A G A G T C G A T C C T G A G T C A A G C T G A C T G C T A C T A G A G T C A C G T A C G T A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:ATAGCAATTAGCCTCT
---CCAATTAG-----
 C G T A A C G T C G T A A C T G A G T C C G T A C G T A A C G T A C G T C G T A A C T G A G T C A G T C A C G T A G T C A C G T
A C G T A C G T A C G T A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G A C G T A C G T A C G T A C G T A C G T