Information for 23-ACTTGACTGGAGG (Motif 35)

C G T A A G T C A C G T A C G T A C T G C G T A A G T C A C G T A C T G A C T G C G T A A C T G A C T G
Reverse Opposite:
A G T C A G T C A C G T A G T C A G T C C G T A A C T G A C G T A G T C C G T A C G T A A C T G A C G T
p-value:1e-5
log p-value:-1.221e+01
Information Content per bp:1.530
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.43%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.7 +/- 11.1bp
Average Position of motif in Background27.5 +/- 14.8bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.64
Offset:-2
Orientation:reverse strand
Alignment:--ACTTGACTGGAGG
NNACTTGCCTT----
 A C G T A C G T C G T A A G T C A C G T A C G T A C T G C G T A A G T C A C G T A C T G A C T G C G T A A C T G A C T G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:2
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--ACTTGACTGGAGG
CCACTTGAA------
 A C G T A C G T C G T A A G T C A C G T A C G T A C T G C G T A A G T C A C G T A C T G A C T G C G T A A C T G A C T G
T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ACTTGACTGGAGG
--TTGACAGC---
 C G T A A G T C A C G T A C G T A C T G C G T A A G T C A C G T A C T G A C T G C G T A A C T G A C T G
A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T

Dux/MA0611.1/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:ACTTGACTGGAGG
--TTGATTGN---
 C G T A A G T C A C G T A C G T A C T G C G T A A G T C A C G T A C T G A C T G C G T A A C T G A C T G
A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:5
Score:0.56
Offset:1
Orientation:reverse strand
Alignment:ACTTGACTGGAGG
-CTTGAGTGGCT-
 C G T A A G T C A C G T A C G T A C T G C G T A A G T C A C G T A C T G A C T G C G T A A C T G A C T G
A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:6
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---ACTTGACTGGAGG
ACCACTTGAA------
 A C G T A C G T A C G T C G T A A G T C A C G T A C G T A C T G C G T A A G T C A C G T A C T G A C T G C G T A A C T G A C T G
T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T A C G T A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:7
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ACTTGACTGGAGG
--TTGACAGG---
 C G T A A G T C A C G T A C G T A C T G C G T A A G T C A C G T A C T G A C T G C G T A A C T G A C T G
A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:8
Score:0.54
Offset:2
Orientation:forward strand
Alignment:ACTTGACTGGAGG
--TWGTCTGV---
 C G T A A G T C A C G T A C G T A C T G C G T A A G T C A C G T A C T G A C T G C G T A A C T G A C T G
A C G T A C G T A G C T G C A T A C T G A C G T A G T C A C G T C T A G T A C G A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:9
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:ACTTGACTGGAGG
NCGTGACN-----
 C G T A A G T C A C G T A C G T A C T G C G T A A G T C A C G T A C T G A C T G C G T A A C T G A C T G
T A C G G T A C C T A G A G C T T C A G C G T A G A T C C G A T A C G T A C G T A C G T A C G T A C G T

E-box(bHLH)/Promoter/Homer

Match Rank:10
Score:0.53
Offset:-2
Orientation:reverse strand
Alignment:--ACTTGACTGGAGG
TCACGTGACCGG---
 A C G T A C G T C G T A A G T C A C G T A C G T A C T G C G T A A G T C A C G T A C T G A C T G C G T A A C T G A C T G
A G C T A G T C C G T A A G T C T C A G C G A T A C T G T C G A A T G C T A G C T A C G T A C G A C G T A C G T A C G T