Information for 4-YGTCAATCCCACWCAA (Motif 3)

G A C T A C T G A C G T G T A C C G T A G T C A G C A T G T A C A G T C A G T C G T C A A G T C C G A T A G T C C G T A T C G A
Reverse Opposite:
A G C T C G A T A C T G G C T A C T A G C A G T A C T G A C T G C A T G C G T A A C G T A C G T A C T G C G T A A G T C C T G A
p-value:1e-15
log p-value:-3.606e+01
Information Content per bp:1.759
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets53.1 +/- 27.2bp
Average Position of motif in Background59.2 +/- 36.5bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0114.1_Egr1_2/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:YGTCAATCCCACWCAA--
--NNAGTCCCACTCNNNN
 G A C T A C T G A C G T G T A C C G T A G T C A G C A T G T A C A G T C A G T C G T C A A G T C C G A T A G T C C G T A T C G A A C G T A C G T
A C G T A C G T T G A C G A T C C G T A C T A G G C A T G T A C G A T C G A T C G T C A A G T C A G C T G A T C T A G C C T A G T G A C T G C A

PH0123.1_Obox3/Jaspar

Match Rank:2
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--YGTCAATCCCACWCAA
ATAGTTAATCCCCCNNA-
 A C G T A C G T G A C T A C T G A C G T G T A C C G T A G T C A G C A T G T A C A G T C A G T C G T C A A G T C C G A T A G T C C G T A T C G A
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G T C A C A G T G T A C G A T C G A T C G A T C A T G C A G C T T A G C C G T A A C G T

PH0122.1_Obox2/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:reverse strand
Alignment:--YGTCAATCCCACWCAA
ATAGTTAATCCCCCTCA-
 A C G T A C G T G A C T A C T G A C G T G T A C C G T A G T C A G C A T G T A C A G T C A G T C G T C A A G T C C G A T A G T C C G T A T C G A
C T G A C A G T G C T A C A T G G C A T G C A T C G T A G C T A C A G T G T A C A G T C G A T C G A T C G A T C A G C T T G A C G C T A A C G T

PH0137.1_Pitx1/Jaspar

Match Rank:4
Score:0.63
Offset:-2
Orientation:reverse strand
Alignment:--YGTCAATCCCACWCAA
NTTGTTAATCCCTCTNN-
 A C G T A C G T G A C T A C T G A C G T G T A C C G T A G T C A G C A T G T A C A G T C A G T C G T C A A G T C C G A T A G T C C G T A T C G A
C G T A C A G T G A C T C A T G G A C T C G A T C G T A C G T A A C G T G A T C A G T C A G T C G A C T A G T C A G C T T G C A C T G A A C G T

Egr1(Zf)/K562-Egr1-ChIP-Seq(GSE32465)/Homer

Match Rank:5
Score:0.62
Offset:5
Orientation:reverse strand
Alignment:YGTCAATCCCACWCAA
-----CRCCCACGCA-
 G A C T A C T G A C G T G T A C C G T A G T C A G C A T G T A C A G T C A G T C G T C A A G T C C G A T A G T C C G T A T C G A
A C G T A C G T A C G T A C G T A C G T G A T C C T G A A G T C T G A C A G T C G T C A A G T C C T A G A G T C G T C A A C G T

PH0121.1_Obox1/Jaspar

Match Rank:6
Score:0.61
Offset:-2
Orientation:reverse strand
Alignment:--YGTCAATCCCACWCAA
NTAGTTAATCCCCTTAN-
 A C G T A C G T G A C T A C T G A C G T G T A C C G T A G T C A G C A T G T A C A G T C A G T C G T C A A G T C C G A T A G T C C G T A T C G A
C T A G C G A T G C T A A C T G G C A T C G A T C G T A C T G A A C G T G T A C A G T C G A T C G A T C A G C T A G C T G C T A G C T A A C G T

EGR4/MA0733.1/Jaspar

Match Rank:7
Score:0.60
Offset:2
Orientation:forward strand
Alignment:YGTCAATCCCACWCAA--
--TTACGCCCACGCATTT
 G A C T A C T G A C G T G T A C C G T A G T C A G C A T G T A C A G T C A G T C G T C A A G T C C G A T A G T C C G T A T C G A A C G T A C G T
A C G T A C G T G A C T G A C T G T C A A G T C C A T G A G T C T G A C A G T C G T C A A G T C A T C G A G T C T G C A G C A T G C A T G C A T

Egr2(Zf)/Thymocytes-Egr2-ChIP-Seq(GSE34254)/Homer

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:YGTCAATCCCACWCAA
---YCCGCCCACGCN-
 G A C T A C T G A C G T G T A C C G T A G T C A G C A T G T A C A G T C A G T C G T C A A G T C C G A T A G T C C G T A T C G A
A C G T A C G T A C G T G A T C G T A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C C T A G A T G C T C G A A C G T

Klf9(Zf)/GBM-Klf9-ChIP-Seq(GSE62211)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:YGTCAATCCCACWCAA
-GCCACRCCCACY---
 G A C T A C T G A C G T G T A C C G T A G T C A G C A T G T A C A G T C A G T C G T C A A G T C C G A T A G T C C G T A T C G A
A C G T T C A G T G A C G T A C T G C A G T A C C T A G G T A C A T G C A G T C G T C A A G T C G A C T A C G T A C G T A C G T

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:10
Score:0.57
Offset:6
Orientation:forward strand
Alignment:YGTCAATCCCACWCAA-
------AGCCACTCAAG
 G A C T A C T G A C G T G T A C C G T A G T C A G C A T G T A C A G T C A G T C G T C A A G T C C G A T A G T C C G T A T C G A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C T G A C T A G T A G C A G T C G C T A A G T C A C G T A G T C G T C A C T G A T A C G