Information for 14-CAATACATGCTGTTTT (Motif 26)

A G T C G T C A C G T A A G C T C G T A A G T C C G T A C G A T A C T G A T G C A C G T A T C G A G C T C G A T A C G T A C G T
Reverse Opposite:
C G T A C G T A C G T A C T G A A T G C C G T A T A C G A G T C C G T A A C G T A C T G A C G T C T G A A C G T A C G T A C T G
p-value:1e-8
log p-value:-1.983e+01
Information Content per bp:1.902
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.3
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.2 +/- 16.4bp
Average Position of motif in Background67.0 +/- 8.8bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:1
Score:0.56
Offset:5
Orientation:forward strand
Alignment:CAATACATGCTGTTTT
-----CCTGCTGAGH-
 A G T C G T C A C G T A A G C T C G T A A G T C C G T A C G A T A C T G A T G C A C G T A T C G A G C T C G A T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G T C G T A C A G C T C T A G A G T C C G A T A C T G C G T A A C T G G T C A A C G T

SPIC/MA0687.1/Jaspar

Match Rank:2
Score:0.56
Offset:3
Orientation:reverse strand
Alignment:CAATACATGCTGTTTT-
---TACTTCCTCTTTTN
 A G T C G T C A C G T A A G C T C G T A A G T C C G T A C G A T A C T G A T G C A C G T A T C G A G C T C G A T A C G T A C G T A C G T
A C G T A C G T A C G T C A G T C G T A A G T C A C G T C G A T G T A C T A G C A C G T A T G C C G A T C A G T C A G T G A C T C A G T

PGR(NR)/EndoStromal-PGR-ChIP-Seq(GSE69539)/Homer

Match Rank:3
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CAATACATGCTGTTTT-
--GAACADWATGTTCTT
 A G T C G T C A C G T A A G C T C G T A A G T C C G T A C G A T A C T G A T G C A C G T A T C G A G C T C G A T A C G T A C G T A C G T
A C G T A C G T C T A G C G T A C G T A A G T C C G T A C A G T C G T A G T C A C G A T A C T G A C G T G C A T A G T C G A C T G C A T

PB0207.1_Zic3_2/Jaspar

Match Rank:4
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:CAATACATGCTGTTTT-
--NNTCCTGCTGTGNNN
 A G T C G T C A C G T A A G C T C G T A A G T C C G T A C G A T A C T G A T G C A C G T A T C G A G C T C G A T A C G T A C G T A C G T
A C G T A C G T G C A T A T C G C A G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G G A C T A C T G G A T C G C A T G T A C

PH0082.1_Irx2/Jaspar

Match Rank:5
Score:0.56
Offset:-1
Orientation:forward strand
Alignment:-CAATACATGCTGTTTT
TAAATACATGTAAAATT
 A C G T A G T C G T C A C G T A A G C T C G T A A G T C C G T A C G A T A C T G A T G C A C G T A T C G A G C T C G A T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PR(NR)/T47D-PR-ChIP-Seq(GSE31130)/Homer

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:CAATACATGCTGTTTT
VAGRACAKNCTGTBC-
 A G T C G T C A C G T A A G C T C G T A A G T C C G T A C G A T A C T G A T G C A C G T A T C G A G C T C G A T A C G T A C G T
T G A C C T G A C T A G T C G A C T G A A T G C C G T A A C T G G C A T G T A C G C A T A T C G G C A T A G C T G A T C A C G T

PH0087.1_Irx6/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CAATACATGCTGTTTT
AAAATACATGTAAAAAT
 A C G T A G T C G T C A C G T A A G C T C G T A A G T C C G T A C G A T A C T G A T G C A C G T A T C G A G C T C G A T A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

PB0206.1_Zic2_2/Jaspar

Match Rank:8
Score:0.55
Offset:2
Orientation:reverse strand
Alignment:CAATACATGCTGTTTT-
--TCNCCTGCTGNGNNN
 A G T C G T C A C G T A A G C T C G T A A G T C C G T A C G A T A C T G A T G C A C G T A T C G A G C T C G A T A C G T A C G T A C G T
A C G T A C G T G C A T A G T C A C G T T G A C T G A C G A C T T C A G A G T C C G A T C T A G A G C T A C T G G A C T C A T G C T A G

PH0084.1_Irx3_2/Jaspar

Match Rank:9
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CAATACATGCTGTTTT
AATATACATGTAATATA
 A C G T A G T C G T C A C G T A A G C T C G T A A G T C C G T A C G A T A C T G A T G C A C G T A T C G A G C T C G A T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PH0086.1_Irx5/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-CAATACATGCTGTTTT
AATATACATGTAAAATT
 A C G T A G T C G T C A C G T A A G C T C G T A A G T C C G T A C G A T A C T G A T G C A C G T A T C G A G C T C G A T A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T