Information for 18-ATTATACACTTAA (Motif 25)

C G T A A C G T A C G T C G T A A C G T G T C A A G T C C G T A A G T C A C G T A C G T C G T A C G T A
Reverse Opposite:
A C G T A C G T C G T A C G T A A C T G C G A T A C T G C A G T G T C A A C G T C G T A C G T A A C G T
p-value:1e-8
log p-value:-1.983e+01
Information Content per bp:1.938
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.9
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets69.8 +/- 24.9bp
Average Position of motif in Background47.6 +/- 8.4bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:1
Score:0.76
Offset:0
Orientation:forward strand
Alignment:ATTATACACTTAA----
CTTAACCACTTAAGGAT
 C G T A A C G T A C G T C G T A A C G T G T C A A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:2
Score:0.75
Offset:0
Orientation:forward strand
Alignment:ATTATACACTTAA----
CATAACCACTTAACAAC
 C G T A A C G T A C G T C G T A A C G T G T C A A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

PH0115.1_Nkx2-6/Jaspar

Match Rank:3
Score:0.70
Offset:1
Orientation:forward strand
Alignment:ATTATACACTTAA----
-TAAGCCACTTAACATT
 C G T A A C G T A C G T C G T A A C G T G T C A A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T C A G T C T G A C T G A C A T G T A G C A G T C C G T A G T A C A C G T A G C T C T G A C G T A T G A C G C T A G A C T G A C T

NKX3-2/MA0122.2/Jaspar

Match Rank:4
Score:0.69
Offset:4
Orientation:forward strand
Alignment:ATTATACACTTAA
----ACCACTTAA
 C G T A A C G T A C G T C G T A A C G T G T C A A G T C C G T A A G T C A C G T A C G T C G T A C G T A
A C G T A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A

Nkx3-1/MA0124.2/Jaspar

Match Rank:5
Score:0.68
Offset:4
Orientation:forward strand
Alignment:ATTATACACTTAA
----ACCACTTAA
 C G T A A C G T A C G T C G T A A C G T G T C A A G T C C G T A A G T C A C G T A C G T C G T A C G T A
A C G T A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A

ISL2/MA0914.1/Jaspar

Match Rank:6
Score:0.68
Offset:5
Orientation:forward strand
Alignment:ATTATACACTTAA
-----GCACTTAA
 C G T A A C G T A C G T C G T A A C G T G T C A A G T C C G T A A G T C A C G T A C G T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:7
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:ATTATACACTTAA
---MRSCACTYAA
 C G T A A C G T A C G T C G T A A C G T G T C A A G T C C G T A A G T C A C G T A C G T C G T A C G T A
A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

NKX2-3/MA0672.1/Jaspar

Match Rank:8
Score:0.65
Offset:4
Orientation:forward strand
Alignment:ATTATACACTTAA-
----ACCACTTGAA
 C G T A A C G T A C G T C G T A A C G T G T C A A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A

PH0114.1_Nkx2-5/Jaspar

Match Rank:9
Score:0.65
Offset:1
Orientation:forward strand
Alignment:ATTATACACTTAA----
-TAAGCCACTTGAATTT
 C G T A A C G T A C G T C G T A A C G T G T C A A G T C C G T A A G T C A C G T A C G T C G T A C G T A A C G T A C G T A C G T A C G T
A C G T G A C T C T G A C T G A C A T G T A G C A G T C G C T A G T A C A C G T G A C T T C A G C G T A T C G A G C A T G A C T A G C T

Nkx2-5/MA0063.1/Jaspar

Match Rank:10
Score:0.64
Offset:6
Orientation:reverse strand
Alignment:ATTATACACTTAA
------CAATTAA
 C G T A A C G T A C G T C G T A A C G T G T C A A G T C C G T A A G T C A C G T A C G T C G T A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T G T A C C G T A G T C A A C G T A C G T C T G A G C T A