Information for 3-GTGACWTCACAGAGTS (Motif 2)

C A T G A C G T A C T G C G T A G T A C C G A T C A G T G T A C C T G A A G T C C G T A A C T G C G T A C T A G C G A T A T C G
Reverse Opposite:
A T G C G C T A A G T C C G A T A G T C A C G T A C T G A G C T A C T G G C T A C G T A A C T G C G A T G T A C T C G A G A T C
p-value:1e-16
log p-value:-3.767e+01
Information Content per bp:1.738
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.00%
Number of Background Sequences with motif1.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets48.5 +/- 24.3bp
Average Position of motif in Background74.1 +/- 9.1bp
Strand Bias (log2 ratio + to - strand density)2.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL009.1_DCE_S_II/Jaspar

Match Rank:1
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:GTGACWTCACAGAGTS
-------CACAGN---
 C A T G A C G T A C T G C G T A G T A C C G A T C A G T G T A C C T G A A G T C C G T A A C T G C G T A C T A G C G A T A T C G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.57
Offset:4
Orientation:forward strand
Alignment:GTGACWTCACAGAGTS---
----GAGCACAGCAGGACA
 C A T G A C G T A C T G C G T A G T A C C G A T C A G T G T A C C T G A A G T C C G T A A C T G C G T A C T A G C G A T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.55
Offset:3
Orientation:reverse strand
Alignment:GTGACWTCACAGAGTS
---AAACCACAGAN--
 C A T G A C G T A C T G C G T A G T A C C G A T C A G T G T A C C T G A A G T C C G T A A C T G C G T A C T A G C G A T A T C G
A C G T A C G T A C G T G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C A C G T A C G T

PB0004.1_Atf1_1/Jaspar

Match Rank:4
Score:0.55
Offset:-3
Orientation:forward strand
Alignment:---GTGACWTCACAGAGTS
ACGATGACGTCATCGA---
 A C G T A C G T A C G T C A T G A C G T A C T G C G T A G T A C C G A T C A G T G T A C C T G A A G T C C G T A A C T G C G T A C T A G C G A T A T C G
C G T A A G T C C A T G T C G A A G C T A C T G C G T A A G T C C T A G G C A T G T A C C T G A A G C T G T A C C T A G C T G A A C G T A C G T A C G T

Tcf4(HMG)/Hct116-Tcf4-ChIP-Seq(SRA012054)/Homer

Match Rank:5
Score:0.55
Offset:3
Orientation:forward strand
Alignment:GTGACWTCACAGAGTS
---ACATCAAAGGNA-
 C A T G A C G T A C T G C G T A G T A C C G A T C A G T G T A C C T G A A G T C C G T A A C T G C G T A C T A G C G A T A T C G
A C G T A C G T A C G T C T G A A T G C G C T A G C A T A T G C C G T A T C G A C T G A C T A G T C A G T A C G G T C A A C G T

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.54
Offset:5
Orientation:reverse strand
Alignment:GTGACWTCACAGAGTS
-----TGCCCAGNHW-
 C A T G A C G T A C T G C G T A G T A C C G A T C A G T G T A C C T G A A G T C C G T A A C T G C G T A C T A G C G A T A T C G
A C G T A C G T A C G T A C G T A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

PB0205.1_Zic1_2/Jaspar

Match Rank:7
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GTGACWTCACAGAGTS---
----CCACACAGCAGGAGA
 C A T G A C G T A C T G C G T A G T A C C G A T C A G T G T A C C T G A A G T C C G T A A C T G C G T A C T A G C G A T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:8
Score:0.54
Offset:3
Orientation:reverse strand
Alignment:GTGACWTCACAGAGTS
---AAACCACAGC---
 C A T G A C G T A C T G C G T A G T A C C G A T C A G T G T A C C T G A A G T C C G T A A C T G C G T A C T A G C G A T A T C G
A C G T A C G T A C G T G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C A C G T A C G T A C G T

PB0206.1_Zic2_2/Jaspar

Match Rank:9
Score:0.54
Offset:4
Orientation:forward strand
Alignment:GTGACWTCACAGAGTS---
----CCACACAGCAGGAGA
 C A T G A C G T A C T G C G T A G T A C C G A T C A G T G T A C C T G A A G T C C G T A A C T G C G T A C T A G C G A T A T C G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

CRE(bZIP)/Promoter/Homer

Match Rank:10
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GTGACWTCACAGAGTS
GTGACGTCACCG----
 C A T G A C G T A C T G C G T A G T A C C G A T C A G T G T A C C T G A A G T C C G T A A C T G C G T A C T A G C G A T A T C G
T A C G A G C T A T C G C T G A A G T C C T A G A G C T A T G C C T G A A T G C T A G C T A C G A C G T A C G T A C G T A C G T