Information for 12-AAGCAGGGCTTTTAAC (Motif 19)

C G T A C G T A A C T G T G A C C G T A A C T G A C T G C T A G A G T C A C G T A C G T A C G T A C G T C G T A C G T A G A T C
Reverse Opposite:
C T A G A C G T A C G T C G T A G T C A C G T A C G T A A C T G A G T C G T A C A G T C A C G T A C T G A G T C A C G T A C G T
p-value:1e-9
log p-value:-2.215e+01
Information Content per bp:1.921
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.8 +/- 27.5bp
Average Position of motif in Background46.6 +/- 20.7bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:1
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:AAGCAGGGCTTTTAAC
--GCAGTGATTT----
 C G T A C G T A A C T G T G A C C G T A A C T G A C T G C T A G A G T C A C G T A C G T A C G T A C G T C G T A C G T A G A T C
A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.53
Offset:1
Orientation:reverse strand
Alignment:AAGCAGGGCTTTTAAC
-TGCTGTGATTT----
 C G T A C G T A A C T G T G A C C G T A A C T G A C T G C T A G A G T C A C G T A C G T A C G T A C G T C G T A C G T A G A T C
A C G T C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:3
Score:0.51
Offset:7
Orientation:forward strand
Alignment:AAGCAGGGCTTTTAAC---
-------CCTTTTATAGNC
 C G T A C G T A A C T G T G A C C G T A A C T G A C T G C T A G A G T C A C G T A C G T A C G T A C G T C G T A C G T A G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

PB0109.1_Bbx_2/Jaspar

Match Rank:4
Score:0.50
Offset:4
Orientation:reverse strand
Alignment:AAGCAGGGCTTTTAAC-----
----NNNNCTGTTAACNNTNN
 C G T A C G T A A C T G T G A C C G T A A C T G A C T G C T A G A G T C A C G T A C G T A C G T A C G T C G T A C G T A G A T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A G T C G A T C T G C A C G T A T A G C A G C T C A T G C A G T A G C T C T G A G T C A G A T C T C G A C T G A C G A T A G T C C T G A

Barhl1/MA0877.1/Jaspar

Match Rank:5
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:AAGCAGGGCTTTTAAC
------NNCAATTANN
 C G T A C G T A A C T G T G A C C G T A A C T G A C T G C T A G A G T C A C G T A C G T A C G T A C G T C G T A C G T A G A T C
A C G T A C G T A C G T A C G T A C G T A C G T T C G A T A C G G A T C T C G A G C T A G A C T G C A T C G T A C T A G T A G C

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.49
Offset:7
Orientation:reverse strand
Alignment:AAGCAGGGCTTTTAAC-
-------CCTTTGATGT
 C G T A C G T A A C T G T G A C C G T A A C T G A C T G C T A G A G T C A C G T A C G T A C G T A C G T C G T A C G T A G A T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C A C G T A C G T A C G T A T C G C G T A C G A T T A C G G A C T

BARHL2/MA0635.1/Jaspar

Match Rank:7
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:AAGCAGGGCTTTTAAC
------ANCGTTTANN
 C G T A C G T A A C T G T G A C C G T A A C T G A C T G C T A G A G T C A C G T A C G T A C G T A C G T C G T A C G T A G A T C
A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G T C G A T C C T A G G C A T A C G T C G A T C G T A C T A G A T G C

TCF7L2/MA0523.1/Jaspar

Match Rank:8
Score:0.48
Offset:5
Orientation:reverse strand
Alignment:AAGCAGGGCTTTTAAC---
-----TNCCTTTGATCTTN
 C G T A C G T A A C T G T G A C C G T A A C T G A C T G C T A G A G T C A C G T A C G T A C G T A C G T C G T A C G T A G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A G T A G C T A G T C A G T C A G C T A G C T A C G T A T C G C G T A C G A T T A G C G A C T A G C T G A C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:9
Score:0.47
Offset:-4
Orientation:reverse strand
Alignment:----AAGCAGGGCTTTTAAC
NNNANTGCAGTGCNNTT---
 A C G T A C G T A C G T A C G T C G T A C G T A A C T G T G A C C G T A A C T G A C T G C T A G A G T C A C G T A C G T A C G T A C G T C G T A C G T A G A T C
T G A C T A C G T A C G T G C A T C G A A C G T T A C G G T A C C G T A A T C G A G C T C A T G T A G C T A C G T C G A G A C T G A C T A C G T A C G T A C G T

PB0143.1_Klf7_2/Jaspar

Match Rank:10
Score:0.47
Offset:0
Orientation:reverse strand
Alignment:AAGCAGGGCTTTTAAC-
NNNTNGGGCGTATNNTN
 C G T A C G T A A C T G T G A C C G T A A C T G A C T G C T A G A G T C A C G T A C G T A C G T A C G T C G T A C G T A G A T C A C G T
G T C A C G T A A C T G G C A T C A G T C T A G A C T G A C T G G A T C C T A G A C G T G C T A G C A T T C A G G A T C A G C T A C G T