Information for 12-AGGGTTAGGAGTG (Motif 18)

C T G A A C T G A C T G C T A G A G C T A C G T C G T A A C T G A C T G C G T A A C T G A C G T A C T G
Reverse Opposite:
A G T C G T C A G T A C A C G T A G T C A G T C A C G T C G T A C T G A A G T C A G T C A G T C A G C T
p-value:1e-9
log p-value:-2.215e+01
Information Content per bp:1.925
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif3.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets40.3 +/- 33.3bp
Average Position of motif in Background34.4 +/- 20.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:1
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:AGGGTTAGGAGTG
-GGATTAGC----
 C T G A A C T G A C T G C T A G A G C T A C G T C G T A A C T G A C T G C G T A A C T G A C G T A C T G
A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C A C G T A C G T A C G T A C G T

Crx/MA0467.1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---AGGGTTAGGAGTG
AAGAGGATTAG-----
 A C G T A C G T A C G T C T G A A C T G A C T G C T A G A G C T A C G T C G T A A C T G A C T G C G T A A C T G A C G T A C T G
T C G A C T G A C T A G T C G A C T A G A C T G G T C A A C G T A G C T C G T A C T A G A C G T A C G T A C G T A C G T A C G T

Otx2(Homeobox)/EpiLC-Otx2-ChIP-Seq(GSE56098)/Homer

Match Rank:3
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-AGGGTTAGGAGTG
VRGGATTARN----
 A C G T C T G A A C T G A C T G C T A G A G C T A C G T C G T A A C T G A C T G C G T A A C T G A C G T A C T G
T C G A C T A G C T A G C T A G G T C A A C G T C G A T C G T A C T G A T A G C A C G T A C G T A C G T A C G T

PITX3/MA0714.1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AGGGTTAGGAGTG
GGGATTANN----
 C T G A A C T G A C T G C T A G A G C T A C G T C G T A A C T G A C T G C G T A A C T G A C G T A C T G
C T A G T C A G C A T G G T C A A G C T G A C T C G T A C T G A A T C G A C G T A C G T A C G T A C G T

GSC/MA0648.1/Jaspar

Match Rank:5
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGGGTTAGGAGTG
NNGGATTAGN----
 A C G T C T G A A C T G A C T G C T A G A G C T A C G T C G T A A C T G A C T G C G T A A C T G A C G T A C T G
C T A G T A C G T C A G T C A G T G C A A C G T G A C T C T G A C T A G A T G C A C G T A C G T A C G T A C G T

Pitx1(Homeobox)/Chicken-Pitx1-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGGGTTAGGAGTG
NGGGATTA------
 A C G T C T G A A C T G A C T G C T A G A G C T A C G T C G T A A C T G A C T G C G T A A C T G A C G T A C T G
T G A C C T A G C T A G T C A G G T C A G C A T G A C T G C T A A C G T A C G T A C G T A C G T A C G T A C G T

GSC2/MA0891.1/Jaspar

Match Rank:7
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-AGGGTTAGGAGTG
GNGGATTAGN----
 A C G T C T G A A C T G A C T G C T A G A G C T A C G T C G T A A C T G A C T G C G T A A C T G A C G T A C T G
C T A G T A G C T C A G C A T G T G C A C G A T C G A T C G T A C T A G A C T G A C G T A C G T A C G T A C G T

GSC(Homeobox)/FrogEmbryos-GSC-ChIP-Seq(DRA000576)/Homer

Match Rank:8
Score:0.58
Offset:0
Orientation:forward strand
Alignment:AGGGTTAGGAGTG
RGGATTAR-----
 C T G A A C T G A C T G C T A G A G C T A C G T C G T A A C T G A C T G C G T A A C T G A C G T A C T G
T C A G C T A G C T A G T G C A C G A T C G A T C G T A C T A G A C G T A C G T A C G T A C G T A C G T

Pitx1/MA0682.1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGGGTTAGGAGTG
GGGATTAA-----
 C T G A A C T G A C T G C T A G A G C T A C G T C G T A A C T G A C T G C G T A A C T G A C G T A C T G
C A T G C T A G C T A G G T C A C G A T A G C T C G T A C T G A A C G T A C G T A C G T A C G T A C G T

OTX2/MA0712.1/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGGGTTAGGAGTG
NGGATTAA-----
 C T G A A C T G A C T G C T A G A G C T A C G T C G T A A C T G A C T G C G T A A C T G A C G T A C T G
T G C A T C A G C T A G G T C A A C G T G C A T C G T A C T G A A C G T A C G T A C G T A C G T A C G T