Information for 8-AGGAGCYCATTACACC (Motif 12)

C G T A A C T G T A C G C G T A C T A G A G T C A G C T G T A C C G T A C G A T C G A T T C G A G T A C T C G A G A T C G T A C
Reverse Opposite:
A C T G C T A G A G C T A C T G A C G T C G T A C G T A A C G T A C T G C T G A A C T G A G T C A C G T A G T C T G A C C G A T
p-value:1e-11
log p-value:-2.645e+01
Information Content per bp:1.725
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.14%
Number of Background Sequences with motif9.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets50.9 +/- 22.2bp
Average Position of motif in Background44.3 +/- 39.3bp
Strand Bias (log2 ratio + to - strand density)-1.8
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POU6F2/MA0793.1/Jaspar

Match Rank:1
Score:0.69
Offset:3
Orientation:forward strand
Alignment:AGGAGCYCATTACACC
---AGCTCATTAT---
 C G T A A C T G T A C G C G T A C T A G A G T C A G C T G T A C C G T A C G A T C G A T T C G A G T A C T C G A G A T C G T A C
A C G T A C G T A C G T C T G A T A C G G A T C C A G T G T A C G T C A A G C T A C G T G C T A G C A T A C G T A C G T A C G T

PH0151.1_Pou6f1_1/Jaspar

Match Rank:2
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGGAGCYCATTACACC-
NNNACCTCATTATCNTN
 C G T A A C T G T A C G C G T A C T A G A G T C A G C T G T A C C G T A C G A T C G A T T C G A G T A C T C G A G A T C G T A C A C G T
C A T G G A T C G T C A C G T A T A C G G T A C A C G T G T A C C G T A C G A T C G A T C G T A C G A T A T G C A C T G C G A T A G T C

Nkx6.1(Homeobox)/Islet-Nkx6.1-ChIP-Seq(GSE40975)/Homer

Match Rank:3
Score:0.58
Offset:6
Orientation:reverse strand
Alignment:AGGAGCYCATTACACC
------YCATTAMC--
 C G T A A C T G T A C G C G T A C T A G A G T C A G C T G T A C C G T A C G A T C G A T T C G A G T A C T C G A G A T C G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A G C T T G A C C G T A A C G T A C G T C G T A G T C A T G A C A C G T A C G T

GSX2/MA0893.1/Jaspar

Match Rank:4
Score:0.57
Offset:4
Orientation:forward strand
Alignment:AGGAGCYCATTACACC
----ACTAATTAAA--
 C G T A A C T G T A C G C G T A C T A G A G T C A G C T G T A C C G T A C G A T C G A T T C G A G T A C T C G A G A T C G T A C
A C G T A C G T A C G T A C G T G T C A A T G C G A C T G T C A C G T A G C A T G C A T G C T A T C G A G T C A A C G T A C G T

PH0045.1_Hoxa1/Jaspar

Match Rank:5
Score:0.57
Offset:0
Orientation:forward strand
Alignment:AGGAGCYCATTACACC
CTGAGCTAATTACCGT
 C G T A A C T G T A C G C G T A C T A G A G T C A G C T G T A C C G T A C G A T C G A T T C G A G T A C T C G A G A T C G T A C
A G T C G A C T C T A G C T G A T C A G A T G C G A C T T G C A C G T A C G A T A C G T C T G A T G A C A G T C A C T G A G C T

HOXD13(Homeobox)/Chicken-Hoxd13-ChIP-Seq(GSE38910)/Homer

Match Rank:6
Score:0.56
Offset:4
Orientation:forward strand
Alignment:AGGAGCYCATTACACC
----NCYAATAAAA--
 C G T A A C T G T A C G C G T A C T A G A G T C A G C T G T A C C G T A C G A T C G A T T C G A G T A C T C G A G A T C G T A C
A C G T A C G T A C G T A C G T C G A T T A G C G A C T G T C A C G T A A C G T C G T A C G T A C G T A G C T A A C G T A C G T

NKX6-2/MA0675.1/Jaspar

Match Rank:7
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AGGAGCYCATTACACC
-----CTAATTAA---
 C G T A A C T G T A C G C G T A C T A G A G T C A G C T G T A C C G T A C G A T C G A T T C G A G T A C T C G A G A T C G T A C
A C G T A C G T A C G T A C G T A C G T A T G C G A C T G T C A G C T A C G A T G C A T C T G A G C T A A C G T A C G T A C G T

BSX/MA0876.1/Jaspar

Match Rank:8
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AGGAGCYCATTACACC
-----CCAATTAA---
 C G T A A C T G T A C G C G T A C T A G A G T C A G C T G T A C C G T A C G A T C G A T T C G A G T A C T C G A G A T C G T A C
A C G T A C G T A C G T A C G T A C G T T A G C G A T C T G C A T C G A A C G T C G A T C G T A T C G A A C G T A C G T A C G T

HOXD13/MA0909.1/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:AGGAGCYCATTACACC
-----CCAATAAAAA-
 C G T A A C T G T A C G C G T A C T A G A G T C A G C T G T A C C G T A C G A T C G A T T C G A G T A C T C G A G A T C G T A C
A C G T A C G T A C G T A C G T A C G T A T G C G A T C G T C A C G T A A G C T C G T A G C T A G T C A G T C A G T C A A C G T

PH0152.1_Pou6f1_2/Jaspar

Match Rank:10
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:AGGAGCYCATTACACC-
GCAACCTCATTATNNNN
 C G T A A C T G T A C G C G T A C T A G A G T C A G C T G T A C C G T A C G A T C G A T T C G A G T A C T C G A G A T C G T A C A C G T
C A T G G T A C G T C A C G T A A T G C G T A C A C G T G T A C C G T A A C G T C G A T C G T A C G A T A T C G C G A T C A G T A G C T