Information for 2-GCCACATGGCAATTGM (Motif 5)

C A T G A T G C G A T C C G T A A G T C C G T A A C G T T A C G A C T G A G T C C G T A C G T A A G C T A C G T C T A G G T A C
Reverse Opposite:
C A T G A G T C C G T A C T G A G C A T A C G T C T A G T G A C A G T C C G T A G C A T C T A G A C G T C A T G A T C G G A T C
p-value:1e-10
log p-value:-2.385e+01
Information Content per bp:1.704
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.51%
Number of Background Sequences with motif12.5
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets61.2 +/- 23.0bp
Average Position of motif in Background47.4 +/- 23.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.14
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SOX4/MA0867.1/Jaspar

Match Rank:1
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCCACATGGCAATTGM--
--AACACTGCAATTGTTC
 C A T G A T G C G A T C C G T A A G T C C G T A A C G T T A C G A C T G A G T C C G T A C G T A A G C T A C G T C T A G G T A C A C G T A C G T
A C G T A C G T C G T A C T G A A G T C G T C A G T A C A G C T A C T G G T A C G T C A G T C A G A C T A G C T A C T G A G C T A C G T G A T C

PH0007.1_Barx1/Jaspar

Match Rank:2
Score:0.60
Offset:5
Orientation:forward strand
Alignment:GCCACATGGCAATTGM-----
-----AAAGTAATTAGTGAAT
 C A T G A T G C G A T C C G T A A G T C C G T A A C G T T A C G A C T G A G T C C G T A C G T A A G C T A C G T C T A G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G T C A G T C A T C G A T A C G G A C T T G C A G T C A A C G T A C G T C T G A A T C G A G C T C A T G G C T A C G T A G C A T

Sox11/MA0869.1/Jaspar

Match Rank:3
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCCACATGGCAATTGM-
--AACACTGAAATTGTT
 C A T G A T G C G A T C C G T A A G T C C G T A A C G T T A C G A C T G A G T C C G T A C G T A A G C T A C G T C T A G G T A C A C G T
A C G T A C G T T C G A C G T A A G T C G T C A G T A C A C G T C T A G G T C A C T G A C G T A A C G T A C G T A C T G A C G T A C G T

Myc/MA0147.2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCCACATGGCAATTGM
AAGCACATGG-------
 A C G T C A T G A T G C G A T C C G T A A G T C C G T A A C G T T A C G A C T G A G T C C G T A C G T A A G C T A C G T C T A G G T A C
T C G A C T G A T A C G A G T C C G T A A G T C C T G A A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PH0009.1_Bsx/Jaspar

Match Rank:5
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GCCACATGGCAATTGM-----
-----CAGGTAATTACCTCAG
 C A T G A T G C G A T C C G T A A G T C C G T A A C G T T A C G A C T G A G T C C G T A C G T A A G C T A C G T C T A G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T T G A C T G C A C T A G C A T G G A C T T G C A G T C A A C G T A C G T C T G A A T G C G A T C A G C T T A G C C T G A C T A G

PH0024.1_Dlx5/Jaspar

Match Rank:6
Score:0.57
Offset:5
Orientation:forward strand
Alignment:GCCACATGGCAATTGM-----
-----GGGGTAATTAGCTCTG
 C A T G A T G C G A T C C G T A A G T C C G T A A C G T T A C G A C T G A G T C C G T A C G T A A G C T A C G T C T A G G T A C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T C G A T C G T C A G T C A G G A C T G T C A C G T A G A C T C A G T C T G A T A C G A G T C A C G T T G A C A C G T A T C G

Msx3/MA0709.1/Jaspar

Match Rank:7
Score:0.57
Offset:8
Orientation:forward strand
Alignment:GCCACATGGCAATTGM
--------CCAATTAA
 C A T G A T G C G A T C C G T A A G T C C G T A A C G T T A C G A C T G A G T C C G T A C G T A A G C T A C G T C T A G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C G A T C T C G A T G C A A C G T G A C T C G T A T C G A

USF2/MA0526.1/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-GCCACATGGCAATTGM
GGTCACATGAC------
 A C G T C A T G A T G C G A T C C G T A A G T C C G T A A C G T T A C G A C T G A G T C C G T A C G T A A G C T A C G T C T A G G T A C
C T A G T C A G A G C T A G T C C G T A A G T C T C G A A C G T A C T G T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T

Nobox/MA0125.1/Jaspar

Match Rank:9
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:GCCACATGGCAATTGM
-------ACCAATTA-
 C A T G A T G C G A T C C G T A A G T C C G T A A C G T T A C G A C T G A G T C C G T A C G T A A G C T A C G T C T A G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A T G C G A T C G T C A G T C A A C G T C G A T C T G A A C G T

MSX1/MA0666.1/Jaspar

Match Rank:10
Score:0.56
Offset:8
Orientation:forward strand
Alignment:GCCACATGGCAATTGM
--------CCAATTAG
 C A T G A T G C G A T C C G T A A G T C C G T A A C G T T A C G A C T G A G T C C G T A C G T A A G C T A C G T C T A G G T A C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A T C T G C A G T C A A C G T A C G T T G C A T C A G