Information for 1-AAGGCAACTG (Motif 4)

C G T A C G T A A C T G A C T G A G T C C T G A C T G A G T A C C G A T C T A G
Reverse Opposite:
G A T C C G T A A C T G G A C T A G C T C T A G T G A C G T A C A C G T A C G T
p-value:1e-10
log p-value:-2.450e+01
Information Content per bp:1.837
Number of Target Sequences with motif17.0
Percentage of Target Sequences with motif3.66%
Number of Background Sequences with motif201.2
Percentage of Background Sequences with motif0.41%
Average Position of motif in Targets50.5 +/- 22.1bp
Average Position of motif in Background50.7 +/- 32.4bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:1
Score:0.74
Offset:0
Orientation:forward strand
Alignment:AAGGCAACTG-
AAGGCAAGTGT
 C G T A C G T A A C T G A C T G A G T C C T G A C T G A G T A C C G A T C T A G A C G T
T G C A C G T A C T A G A C T G A G T C T C G A C T G A T A C G A C G T C T A G A G C T

Nr2e1/MA0676.1/Jaspar

Match Rank:2
Score:0.67
Offset:-2
Orientation:forward strand
Alignment:--AAGGCAACTG
AAAAGTCAA---
 A C G T A C G T C G T A C G T A A C T G A C T G A G T C C T G A C T G A G T A C C G A T C T A G
G C T A C T G A C T G A C T G A C T A G A G C T A G T C C G T A G C T A A C G T A C G T A C G T

PB0047.1_Myf6_1/Jaspar

Match Rank:3
Score:0.64
Offset:0
Orientation:reverse strand
Alignment:AAGGCAACTG------
CNGACACCTGTTCNNN
 C G T A C G T A A C T G A C T G A G T C C T G A C T G A G T A C C G A T C T A G A C G T A C G T A C G T A C G T A C G T A C G T
T G A C C T A G T C A G T G C A A G T C C T G A T G A C A T G C C G A T C T A G A G C T A G C T T A G C G A C T A G C T A G T C

Ascl1(bHLH)/NeuralTubes-Ascl1-ChIP-Seq(GSE55840)/Homer

Match Rank:4
Score:0.64
Offset:2
Orientation:reverse strand
Alignment:AAGGCAACTG----
--NVCAGCTGBBNN
 C G T A C G T A A C T G A C T G A G T C C T G A C T G A G T A C C G A T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T T C G A T A C G G T A C C G T A A T C G T G A C C G A T A C T G A T G C A T G C T C A G G A T C

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:5
Score:0.64
Offset:1
Orientation:forward strand
Alignment:AAGGCAACTG-
-NNACAGCTGC
 C G T A C G T A A C T G A C T G A G T C C T G A C T G A G T A C C G A T C T A G A C G T
A C G T C G T A T G A C T C G A A G T C C G T A A T C G A T G C A C G T A C T G A G T C

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:6
Score:0.63
Offset:3
Orientation:reverse strand
Alignment:AAGGCAACTG---
---CCAACTGCCA
 C G T A C G T A A C T G A C T G A G T C C T G A C T G A G T A C C G A T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A

Atoh1(bHLH)/Cerebellum-Atoh1-ChIP-Seq(GSE22111)/Homer

Match Rank:7
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AAGGCAACTG----
--GCCAGCTGBTNB
 C G T A C G T A A C T G A C T G A G T C C T G A C T G A G T A C C G A T C T A G A C G T A C G T A C G T A C G T
A C G T A C G T T C A G T A G C A G T C C G T A A C T G G T A C A C G T A C T G A T C G A G C T T G C A A G T C

Myb/MA0100.2/Jaspar

Match Rank:8
Score:0.61
Offset:3
Orientation:forward strand
Alignment:AAGGCAACTG---
---CCAACTGCCA
 C G T A C G T A A C T G A C T G A G T C C T G A C T G A G T A C C G A T C T A G A C G T A C G T A C G T
A C G T A C G T A C G T A G T C G A T C C G T A C T G A A G T C C G A T A C T G G A T C G T A C G C T A

Myod1/MA0499.1/Jaspar

Match Rank:9
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AAGGCAACTG-----
--TGCAGCTGTCCCT
 C G T A C G T A A C T G A C T G A G T C C T G A C T G A G T A C C G A T C T A G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

Myog/MA0500.1/Jaspar

Match Rank:10
Score:0.61
Offset:2
Orientation:forward strand
Alignment:AAGGCAACTG---
--GACAGCTGCAG
 C G T A C G T A A C T G A C T G A G T C C T G A C T G A G T A C C G A T C T A G A C G T A C G T A C G T
A C G T A C G T T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G