Information for 1-YTSTGTWSTTWYCCTG (Motif 2)

A G C T A C G T A T G C A C G T A C T G A C G T G C A T A T C G A G C T A C G T C G A T A G C T A G T C A G T C A C G T A T C G
Reverse Opposite:
A T G C C G T A A C T G A C T G C T G A C G T A C G T A T C G A T A G C C G T A C G T A A G T C C G T A A T C G C G T A C T G A
p-value:1e-12
log p-value:-2.809e+01
Information Content per bp:1.840
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.0 +/- 32.5bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0119.1_Foxa2_2/Jaspar

Match Rank:1
Score:0.55
Offset:-2
Orientation:reverse strand
Alignment:--YTSTGTWSTTWYCCTG
NCNTTTGTTATTTNN---
 A C G T A C G T A G C T A C G T A T G C A C G T A C T G A C G T G C A T A T C G A G C T A C G T C G A T A G C T A G T C A G T C A C G T A T C G
A T G C A T G C A T C G A G C T C A G T C A G T C T A G G C A T G A C T T C G A C A G T G A C T G C A T A G C T A G C T A C G T A C G T A C G T

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:2
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:YTSTGTWSTTWYCCTG
-NNTGTGGTTT-----
 A G C T A C G T A T G C A C G T A C T G A C G T G C A T A T C G A G C T A C G T C G A T A G C T A G T C A G T C A C G T A T C G
A C G T A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.55
Offset:1
Orientation:forward strand
Alignment:YTSTGTWSTTWYCCTG
-GCTGTGGTTT-----
 A G C T A C G T A T G C A C G T A C T G A C G T G C A T A T C G A G C T A C G T C G A T A G C T A G T C A G T C A C G T A T C G
A C G T A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:YTSTGTWSTTWYCCTG
GTCTGTGGTTT-----
 A G C T A C G T A T G C A C G T A C T G A C G T G C A T A T C G A G C T A C G T C G A T A G C T A G T C A G T C A C G T A T C G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T A C G T A C G T A C G T

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:5
Score:0.54
Offset:8
Orientation:forward strand
Alignment:YTSTGTWSTTWYCCTG--
--------ATTTCCTGTN
 A G C T A C G T A T G C A C G T A C T G A C G T G C A T A T C G A G C T A C G T C G A T A G C T A G T C A G T C A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:6
Score:0.54
Offset:2
Orientation:reverse strand
Alignment:YTSTGTWSTTWYCCTG
--CTGTGGTTTN----
 A G C T A C G T A T G C A C G T A C T G A C G T G C A T A T C G A G C T A C G T C G A T A G C T A G T C A G T C A C G T A T C G
A C G T A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T A C G T A C G T A C G T

ZNF317(Zf)/HEK293-ZNF317.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:7
Score:0.53
Offset:0
Orientation:forward strand
Alignment:YTSTGTWSTTWYCCTG
GTCWGCTGTYYCTCT-
 A G C T A C G T A T G C A C G T A C T G A C G T G C A T A T C G A G C T A C G T C G A T A G C T A G T C A G T C A C G T A T C G
C T A G A C G T A G T C C G T A A C T G A G T C G C A T A C T G G C A T A G T C G A C T G A T C G C A T A G T C A G C T A C G T

Spz1/MA0111.1/Jaspar

Match Rank:8
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:YTSTGTWSTTWYCCTG
----GCTGTTACCCT-
 A G C T A C G T A T G C A C G T A C T G A C G T G C A T A T C G A G C T A C G T C G A T A G C T A G T C A G T C A C G T A T C G
A C G T A C G T A C G T A C G T A C T G T G A C A G C T A T C G G C A T C G A T G C T A G T A C A G T C T A G C A G C T A C G T

EWS:FLI1-fusion(ETS)/SK_N_MC-EWS:FLI1-ChIP-Seq(SRA014231)/Homer

Match Rank:9
Score:0.52
Offset:8
Orientation:reverse strand
Alignment:YTSTGTWSTTWYCCTG--
--------ATTTCCTGTN
 A G C T A C G T A T G C A C G T A C T G A C G T G C A T A T C G A G C T A C G T C G A T A G C T A G T C A G T C A C G T A T C G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T G A A G C T A C G T A C G T A G T C A G T C A C G T A C T G G A C T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:YTSTGTWSTTWYCCTG
NNHTGTGGTTWN----
 A G C T A C G T A T G C A C G T A C T G A C G T G C A T A T C G A G C T A C G T C G A T A G C T A G T C A G T C A C G T A T C G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T A C G T A C G T