Information for 1-GAGTKCAATGCAC (Motif 1)

C T A G C T G A C T A G C A G T A C G T A T G C C G T A T C G A C A G T T C A G A G T C C G T A A G T C
Reverse Opposite:
C T A G A C G T C T A G A G T C G T C A A G C T C G A T A T C G G T C A G T C A A G T C G A C T A G T C
p-value:1e-14
log p-value:-3.441e+01
Information Content per bp:1.697
Number of Target Sequences with motif15.0
Percentage of Target Sequences with motif3.23%
Number of Background Sequences with motif73.0
Percentage of Background Sequences with motif0.15%
Average Position of motif in Targets55.3 +/- 25.0bp
Average Position of motif in Background52.4 +/- 24.4bp
Strand Bias (log2 ratio + to - strand density)0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FOXH1/MA0479.1/Jaspar

Match Rank:1
Score:0.68
Offset:3
Orientation:forward strand
Alignment:GAGTKCAATGCAC-
---TCCAATCCACA
 C T A G C T G A C T A G C A G T A C G T A T G C C G T A T C G A C A G T T C A G A G T C C G T A A G T C A C G T
A C G T A C G T A C G T A G C T A G T C T A G C C G T A C G T A A C G T G T A C G T A C C G T A A G T C C G T A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.66
Offset:4
Orientation:reverse strand
Alignment:GAGTKCAATGCAC---
----SSAATCCACANN
 C T A G C T G A C T A G C A G T A C G T A T G C C G T A T C G A C A G T T C A G A G T C C G T A A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T G C T A G C C T G A C G T A A C G T G T A C G T A C C T G A A G T C C G T A C T G A G T A C

ZNF354C/MA0130.1/Jaspar

Match Rank:3
Score:0.55
Offset:7
Orientation:forward strand
Alignment:GAGTKCAATGCAC
-------ATCCAC
 C T A G C T G A C T A G C A G T A C G T A T G C C G T A T C G A C A G T T C A G A G T C C G T A A G T C
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:4
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAGTKCAATGCAC
AGATGCAATCCC-
 C T A G C T G A C T A G C A G T A C G T A T G C C G T A T C G A C A G T T C A G A G T C C G T A A G T C
T C G A C T A G C T G A A G C T A C T G G T A C G T C A T G C A A G C T T G A C T A G C A G T C A C G T

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:5
Score:0.54
Offset:0
Orientation:reverse strand
Alignment:GAGTKCAATGCAC-
NAGGTCANTGACCT
 C T A G C T G A C T A G C A G T A C G T A T G C C G T A T C G A C A G T T C A G A G T C C G T A A G T C A C G T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T

PB0091.1_Zbtb3_1/Jaspar

Match Rank:6
Score:0.54
Offset:0
Orientation:forward strand
Alignment:GAGTKCAATGCAC----
AATCGCACTGCATTCCG
 C T A G C T G A C T A G C A G T A C G T A T G C C G T A T C G A C A G T T C A G A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0030.1_Hnf4a_1/Jaspar

Match Rank:7
Score:0.52
Offset:-5
Orientation:forward strand
Alignment:-----GAGTKCAATGCAC
CTCCAGGGGTCAATTGA-
 A C G T A C G T A C G T A C G T A C G T C T A G C T G A C T A G C A G T A C G T A T G C C G T A T C G A C A G T T C A G A G T C C G T A A G T C
A T G C C A G T A G C T T G A C G T C A T C A G C T A G A C T G A C T G A C G T A G T C T G C A G T C A A G C T G C A T C A T G T G C A A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:8
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-GAGTKCAATGCAC-
AGAGTCCAAAGTCCA
 A C G T C T A G C T G A C T A G C A G T A C G T A T G C C G T A T C G A C A G T T C A G A G T C C G T A A G T C A C G T
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

PB0005.1_Bbx_1/Jaspar

Match Rank:9
Score:0.51
Offset:0
Orientation:forward strand
Alignment:GAGTKCAATGCAC--
TAATTCAATGAAGTG
 C T A G C T G A C T A G C A G T A C G T A T G C C G T A T C G A C A G T T C A G A G T C C G T A A G T C A C G T A C G T
G C A T G C T A C T G A C G A T C G A T T G A C G C T A C G T A C G A T A C T G C G T A G C T A A T C G G C A T C T A G

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GAGTKCAATGCAC-
CANAGNNCAAAGTCCA
 A C G T A C G T C T A G C T G A C T A G C A G T A C G T A T G C C G T A T C G A C A G T T C A G A G T C C G T A A G T C A C G T
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A