Information for 3-TCAAGAAGCAGAC (Motif 6)

A C G T A G T C C G T A C G T A A C T G G C T A C G T A C T A G A T G C C G T A A C T G G T C A A T G C
Reverse Opposite:
A T C G A C G T A G T C A C G T A T C G A G T C G A C T C G A T A G T C A C G T C G A T A C T G C G T A
p-value:1e-12
log p-value:-2.777e+01
Information Content per bp:1.845
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets56.0 +/- 27.9bp
Average Position of motif in Background49.8 +/- 25.8bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0154.1_Osr1_2/Jaspar

Match Rank:1
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TCAAGAAGCAGAC
NNNTTAGGTAGCNTNT
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G G C T A C G T A C T A G A T G C C G T A A C T G G T C A A T G C
A C T G C A G T G C T A C A G T A G C T C G T A C T A G A C T G C G A T C T G A C T A G A G T C C T G A C G A T C T A G G A C T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.60
Offset:7
Orientation:reverse strand
Alignment:TCAAGAAGCAGAC----
-------CCAGACRSVB
 A C G T A G T C C G T A C G T A A C T G G C T A C G T A C T A G A T G C C G T A A C T G G T C A A T G C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

PB0155.1_Osr2_2/Jaspar

Match Rank:3
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TCAAGAAGCAGAC
NNTGTAGGTAGCANNT
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G G C T A C G T A C T A G A T G C C G T A A C T G G T C A A T G C
A C T G C T A G C G A T C A T G A G C T C G T A C T A G A C T G C G A T C T G A T A C G A G T C C T G A C T G A C T A G G A C T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.59
Offset:2
Orientation:forward strand
Alignment:TCAAGAAGCAGAC-
--AGGTGHCAGACA
 A C G T A G T C C G T A C G T A A C T G G C T A C G T A C T A G A T G C C G T A A C T G G T C A A T G C A C G T
A C G T A C G T C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.58
Offset:7
Orientation:reverse strand
Alignment:TCAAGAAGCAGAC--
-------CCAGACAG
 A C G T A G T C C G T A C G T A A C T G G C T A C G T A C T A G A T G C C G T A A C T G G T C A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

PH0171.1_Nkx2-1/Jaspar

Match Rank:6
Score:0.57
Offset:-4
Orientation:reverse strand
Alignment:----TCAAGAAGCAGAC
AANTTCAAGTGGCTTN-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G G C T A C G T A C T A G A T G C C G T A A C T G G T C A A T G C
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A A C G T

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:7
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:TCAAGAAGCAGAC--
-------BCAGACWA
 A C G T A G T C C G T A C G T A A C T G G C T A C G T A C T A G A T G C C G T A A C T G G T C A A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---TCAAGAAGCAGAC
NGNTCTAGAACCNGV-
 A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G G C T A C G T A C T A G A T G C C G T A A C T G G T C A A T G C
C T G A T C A G G C T A A G C T A G T C G A C T C T G A C T A G T G C A C T G A A G T C G T A C G A T C A C T G T C G A A C G T

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:9
Score:0.56
Offset:2
Orientation:reverse strand
Alignment:TCAAGAAGCAGAC--
--AGGTGNCAGACAG
 A C G T A G T C C G T A C G T A A C T G G C T A C G T A C T A G A T G C C G T A A C T G G T C A A T G C A C G T A C G T
A C G T A C G T C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

PH0113.1_Nkx2-4/Jaspar

Match Rank:10
Score:0.55
Offset:-4
Orientation:reverse strand
Alignment:----TCAAGAAGCAGAC
AATTTCAAGTGGCTTN-
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A C G T A A C T G G C T A C G T A C T A G A T G C C G T A A C T G G T C A A T G C
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A A C G T