Information for 3-CCTTCACTTTCCCTTA (Motif 4)

A G T C G T A C G A C T A C G T G T A C G C T A A G T C G A C T A C G T C G A T A G T C A G T C G A T C A G C T A G C T G T C A
Reverse Opposite:
A C G T C T G A C T G A C T A G C T A G C T A G C G T A T C G A C G T A A C T G C G A T A C T G C G T A C G T A A C T G A C T G
p-value:1e-13
log p-value:-3.117e+01
Information Content per bp:1.730
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets55.4 +/- 27.0bp
Average Position of motif in Background7.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM1/MA0508.1/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---CCTTCACTTTCCCTTA
TCACTTTCACTTTCN----
 A C G T A C G T A C G T A G T C G T A C G A C T A C G T G T A C G C T A A G T C G A C T A C G T C G A T A G T C A G T C G A T C A G C T A G C T G T C A
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T A C G T A C G T A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.67
Offset:-1
Orientation:forward strand
Alignment:-CCTTCACTTTCCCTTA
ACTTTCACTTTC-----
 A C G T A G T C G T A C G A C T A C G T G T A C G C T A A G T C G A C T A C G T C G A T A G T C A G T C G A T C A G C T A G C T G T C A
T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C A C G T A C G T A C G T A C G T A C G T

IRF1/MA0050.2/Jaspar

Match Rank:3
Score:0.67
Offset:-5
Orientation:forward strand
Alignment:-----CCTTCACTTTCCCTTA
TTTTACTTTCACTTTCACTTT
 A C G T A C G T A C G T A C G T A C G T A G T C G T A C G A C T A C G T G T A C G C T A A G T C G A C T A C G T C G A T A G T C A G T C G A T C A G C T A G C T G T C A
G A C T A G C T A G C T A G C T C T G A A T G C C G A T A G C T A G C T A G T C C T G A A T G C G C A T G A C T G A C T A G T C C G T A A G T C G A C T G C A T G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:4
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-CCTTCACTTTCCCTTA
ACTTTCACTTTC-----
 A C G T A G T C G T A C G A C T A C G T G T A C G C T A A G T C G A C T A C G T C G A T A G T C A G T C G A T C A G C T A G C T G T C A
C T G A A T G C G A C T C G A T A G C T A G T C C G T A A T G C A C G T A C G T G A C T A G T C A C G T A C G T A C G T A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:5
Score:0.62
Offset:-6
Orientation:reverse strand
Alignment:------CCTTCACTTTCCCTTA
GTTTTGCTTTCACTTTCC----
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G T A C G A C T A C G T G T A C G C T A A G T C G A C T A C G T C G A T A G T C A G T C G A T C A G C T A G C T G T C A
C A T G C G A T C G A T G C A T A G C T T C A G A T C G A C G T A C G T A C G T A G T C C T A G A G T C A C G T C G A T A C G T A G T C T A G C A C G T A C G T A C G T A C G T

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:6
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CCTTCACTTTCCCTTA
AGTTTCAGTTTC-----
 A C G T A G T C G T A C G A C T A C G T G T A C G C T A A G T C G A C T A C G T C G A T A G T C A G T C G A T C A G C T A G C T G T C A
C T G A A T C G A G C T A G C T A C G T T A G C C T G A T A C G C G A T A C G T G A C T A G T C A C G T A C G T A C G T A C G T A C G T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CCTTCACTTTCCCTTA
ASTTTCASTTYC-----
 A C G T A G T C G T A C G A C T A C G T G T A C G C T A A G T C G A C T A C G T C G A T A G T C A G T C G A T C A G C T A G C T G T C A
C T G A A T G C G C A T G A C T A G C T A G T C C T G A A T G C G C A T C G A T A G T C A G T C A C G T A C G T A C G T A C G T A C G T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:8
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CCTTCACTTTCCCTTA
RSTTTCRSTTTC-----
 A C G T A G T C G T A C G A C T A C G T G T A C G C T A A G T C G A C T A C G T C G A T A G T C A G T C G A T C A G C T A G C T G T C A
T C G A A T G C A C G T A C G T A G C T A G T C C T G A A T G C G C A T G A C T A G C T G A T C A C G T A C G T A C G T A C G T A C G T

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:9
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-CCTTCACTTTCCCTTA
ASTTTCACTTCC-----
 A C G T A G T C G T A C G A C T A C G T G T A C G C T A A G T C G A C T A C G T C G A T A G T C A G T C G A T C A G C T A G C T G T C A
C T G A A T G C G C A T G A C T G A C T A G T C G C T A A T G C G C A T C G A T A G T C G A T C A C G T A C G T A C G T A C G T A C G T

SA0003.1_at_AC_acceptor/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CCTTCACTTTCCCTTA----
CCTTTACCCTTCTTCACCTT
 A G T C G T A C G A C T A C G T G T A C G C T A A G T C G A C T A C G T C G A T A G T C A G T C G A T C A G C T A G C T G T C A A C G T A C G T A C G T A C G T
A G T C A G T C G A C T G C A T G C A T G C T A G A T C G A T C A G C T G A C T G C A T G A T C A G C T A G C T G A T C C G T A A G T C G A T C A G C T C G A T