Information for 1-MTTATGRACAWWG (Motif 3)

T G C A A C G T A C G T G T C A A C G T A C T G C T A G C G T A A G T C C G T A C G A T C G T A A C T G
Reverse Opposite:
A G T C C G A T G C T A A C G T A C T G G C A T A G T C A G T C C G T A A C G T C G T A C G T A A C G T
p-value:1e-13
log p-value:-3.117e+01
Information Content per bp:1.843
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif1.42%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets42.3 +/- 24.6bp
Average Position of motif in Background68.8 +/- 19.2bp
Strand Bias (log2 ratio + to - strand density)-1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer

Match Rank:1
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:MTTATGRACAWWG-
----GGAACAAAGR
 T G C A A C G T A C G T G T C A A C G T A C T G C T A G C G T A A G T C C G T A C G A T C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T C A G T C A G T C G A C G T A A G T C C G T A C G T A C G T A A C T G T C A G

POU2F1/MA0785.1/Jaspar

Match Rank:2
Score:0.62
Offset:0
Orientation:forward strand
Alignment:MTTATGRACAWWG
AATATGCAAATT-
 T G C A A C G T A C G T G T C A A C G T A C T G C T A G C G T A A G T C C G T A C G A T C G T A A C T G
G C T A C G T A G A C T C G T A A G C T C A T G A G T C C G T A C T G A C G T A C G A T C A G T A C G T

PB0061.1_Sox11_1/Jaspar

Match Rank:3
Score:0.62
Offset:1
Orientation:forward strand
Alignment:MTTATGRACAWWG-----
-ATAAGAACAAAGGACTA
 T G C A A C G T A C G T G T C A A C G T A C T G C T A G C G T A A G T C C G T A C G A T C G T A A C T G A C G T A C G T A C G T A C G T A C G T
A C G T G C T A A C G T C G T A C G T A C T A G T C G A C G T A A G T C C G T A G T C A C G T A C T A G T C A G T C G A A G T C G C A T G C T A

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:4
Score:0.61
Offset:4
Orientation:reverse strand
Alignment:MTTATGRACAWWG-
----VRRACAAWGG
 T G C A A C G T A C G T G T C A A C G T A C T G C T A G C G T A A G T C C G T A C G A T C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G

Sox2(HMG)/mES-Sox2-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.61
Offset:5
Orientation:reverse strand
Alignment:MTTATGRACAWWG--
-----GAACAATGGN
 T G C A A C G T A C G T G T C A A C G T A C T G C T A G C G T A A G T C C G T A C G A T C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G T A C G

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.61
Offset:7
Orientation:reverse strand
Alignment:MTTATGRACAWWG
-------ACAAAG
 T G C A A C G T A C G T G T C A A C G T A C T G C T A G C G T A A G T C C G T A C G A T C G T A A C T G
A C G T A C G T A C G T A C G T A C G T A C G T A C G T G T C A A T G C C G T A T G C A C G T A C T A G

POU3F1/MA0786.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:forward strand
Alignment:MTTATGRACAWWG
-TTATGCAAATTA
 T G C A A C G T A C G T G T C A A C G T A C T G C T A G C G T A A G T C C G T A C G A T C G T A A C T G
A C G T C G A T G C A T C T G A G A C T C A T G A G T C C G T A C G T A C G T A C G A T C A G T G C T A

PH0148.1_Pou3f3/Jaspar

Match Rank:8
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---MTTATGRACAWWG-
TNNATTATGCATANNTT
 A C G T A C G T A C G T T G C A A C G T A C G T G T C A A C G T A C T G C T A G C G T A A G T C C G T A C G A T C G T A A C T G A C G T
G C A T G C A T G A C T G T C A C G A T C G A T C G T A A G C T C A T G G T A C C T G A C G A T C T G A G C A T G A C T C G A T C G A T

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:9
Score:0.59
Offset:5
Orientation:forward strand
Alignment:MTTATGRACAWWG--
-----RAACAATGGN
 T G C A A C G T A C G T G T C A A C G T A C T G C T A G C G T A A G T C C G T A C G A T C G T A A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C

Sox6/MA0515.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:reverse strand
Alignment:MTTATGRACAWWG-
----AAAACAATGG
 T G C A A C G T A C G T G T C A A C G T A C T G C T A G C G T A A G T C C G T A C G A T C G T A A C T G A C G T
A C G T A C G T A C G T A C G T T C G A C T G A T C G A C G T A A G T C C G T A C G T A C G A T C T A G T C A G