Information for 7-GCTCAGACTC (Motif 19)

A C T G A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A G T C
Reverse Opposite:
A C T G C G T A A C T G A C G T A G T C A C G T A C T G C G T A A C T G A G T C
p-value:1e-5
log p-value:-1.338e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.81%
Number of Background Sequences with motif2.7
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets45.0 +/- 19.7bp
Average Position of motif in Background49.6 +/- 6.6bp
Strand Bias (log2 ratio + to - strand density)-1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.80
Offset:0
Orientation:reverse strand
Alignment:GCTCAGACTC
GCTCGGSCTC
 A C T G A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A G T C
C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C

Smad3(MAD)/NPC-Smad3-ChIP-Seq(GSE36673)/Homer

Match Rank:2
Score:0.65
Offset:2
Orientation:reverse strand
Alignment:GCTCAGACTC
--BCAGACWA
 A C T G A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A G T C
A C G T A C G T A T G C A G T C C G T A C T A G G T C A A G T C C G T A T C G A

PB0203.1_Zfp691_2/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:GCTCAGACTC-------
TACGAGACTCCTCTAAC
 A C T G A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
C A G T C T G A A T G C A C T G C G T A C A T G C T G A A T G C A C G T A G T C T G A C A G C T G A T C C G A T T G C A G T C A T A G C

PB0130.1_Gm397_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCTCAGACTC--
AGCGGCACACACGCAA
 A C G T A C G T A C G T A C G T A C T G A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A G T C A C G T A C G T
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:GCTCAGACTC--
--CCAGACRSVB
 A C T G A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A G T C A C G T A C G T
A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:6
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-GCTCAGACTC
TGCCCAGNHW-
 A C G T A C T G A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A G T C
C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.59
Offset:2
Orientation:reverse strand
Alignment:GCTCAGACTC
--CCAGACAG
 A C T G A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A G T C
A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G

POL002.1_INR/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:GCTCAGACTC
--TCAGTCTT
 A C T G A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A G T C
A C G T A C G T C A G T A G T C C G T A A T C G G A C T G A T C A G C T A G C T

POL013.1_MED-1/Jaspar

Match Rank:9
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCTCAGACTC
GCTCCG----
 A C T G A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A G T C
A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:GCTCAGACTC
GCAGTGATTT
 A C T G A G T C A C G T A G T C C G T A A C T G C G T A A G T C A C G T A G T C
C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T