Information for 5-TGGTACCACT (Motif 18)

C G A T A C T G A C T G A G C T C G T A G A T C A G T C C G T A A G T C A C G T
Reverse Opposite:
C G T A T C A G C G A T A C T G C T A G A C G T C T G A A G T C G T A C C G T A
p-value:1e-7
log p-value:-1.742e+01
Information Content per bp:1.853
Number of Target Sequences with motif11.0
Percentage of Target Sequences with motif2.24%
Number of Background Sequences with motif28.8
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets60.3 +/- 21.5bp
Average Position of motif in Background36.5 +/- 24.6bp
Strand Bias (log2 ratio + to - strand density)-0.8
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0059.1_Six6_1/Jaspar

Match Rank:1
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----TGGTACCACT---
AATAGGGTATCATATAT
 A C G T A C G T A C G T A C G T C G A T A C T G A C T G A G C T C G T A G A T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A C T A G A C T G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C G T A C G A T G C T A G A C T

PH0161.1_Six1/Jaspar

Match Rank:2
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TGGTACCACT---
GATGGGGTATCATTTTT
 A C G T A C G T A C G T A C G T C G A T A C T G A C T G A G C T C G T A G A T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T A G G C T A C A G T T C A G C T A G A T C G T C A G A C G T C T G A A C G T G A T C C T G A G A C T C A G T G C A T A C G T C A G T

PH0162.1_Six2/Jaspar

Match Rank:3
Score:0.63
Offset:-4
Orientation:forward strand
Alignment:----TGGTACCACT---
AATGGGGTATCACGTTT
 A C G T A C G T A C G T A C G T C G A T A C T G A C T G A G C T C G T A G A T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T G A G C T A C A G T T C A G C T A G A C T G C T A G A C G T C T G A A C G T G A T C C T G A G A T C C A G T G C A T G A C T C A G T

Six3/MA0631.1/Jaspar

Match Rank:4
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TGGTACCACT---
GATAGGGTATCACTAAT
 A C G T A C G T A C G T A C G T C G A T A C T G A C T G A G C T C G T A G A T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0163.1_Six3/Jaspar

Match Rank:5
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----TGGTACCACT---
GATAGGGTATCACTAAT
 A C G T A C G T A C G T A C G T C G A T A C T G A C T G A G C T C G T A G A T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T A G C G T A C G A T C T G A T A C G A C T G T C A G A C G T C T G A A C G T G A T C T C G A G A T C G C A T C G A T G C T A A C G T

PH0166.1_Six6_2/Jaspar

Match Rank:6
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGGTACCACT---
AATAGGGTATCAATATT
 A C G T A C G T A C G T A C G T C G A T A C T G A C T G A G C T C G T A G A T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T G A C G T A C G A T T C G A C T A G C A T G T C A G C A G T C T G A A C G T G A T C G C T A G C T A G A C T G C T A G A C T A C G T

PH0165.1_Six6_1/Jaspar

Match Rank:7
Score:0.61
Offset:-4
Orientation:forward strand
Alignment:----TGGTACCACT---
AATAGGGTATCAATTAT
 A C G T A C G T A C G T A C G T C G A T A C T G A C T G A G C T C G T A G A T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
C T G A G C T A C G A T T C G A T C A G A C T G T C A G A C G T C T G A A C G T G A T C C G T A G T C A C G A T G C A T G C T A A C G T

PB0156.1_Plagl1_2/Jaspar

Match Rank:8
Score:0.61
Offset:-3
Orientation:reverse strand
Alignment:---TGGTACCACT----
NNNNGGTACCCCCCANN
 A C G T A C G T A C G T C G A T A C T G A C T G A G C T C G T A G A T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
G C T A C T G A C T A G C A T G C A T G C A T G G A C T C G T A A G T C T A G C A G T C A G T C G A T C G A T C C G T A T A C G G A T C

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:9
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:TGGTACCACT---
---MRSCACTYAA
 C G A T A C T G A C T G A G C T C G T A G A T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T G T C A C T G A T A G C A G T C C G T A G T A C G C A T A G T C C T G A T C G A

NKX2-3/MA0672.1/Jaspar

Match Rank:10
Score:0.59
Offset:4
Orientation:forward strand
Alignment:TGGTACCACT----
----ACCACTTGAA
 C G A T A C T G A C T G A G C T C G T A G A T C A G T C C G T A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A