Information for 8-ACMARAYACTTTC (Motif 11)

G C T A A G T C G T A C C G T A C T A G T C G A G A T C C G T A G A T C A G C T A C G T C G A T A G T C
Reverse Opposite:
A C T G G C T A C G T A C T G A C T A G A C G T C T A G A G C T A G T C A C G T A C T G A C T G C G A T
p-value:1e-9
log p-value:-2.233e+01
Information Content per bp:1.777
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif1.63%
Number of Background Sequences with motif6.2
Percentage of Background Sequences with motif0.05%
Average Position of motif in Targets53.1 +/- 23.6bp
Average Position of motif in Background64.9 +/- 17.1bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0165.1_Sox11_2/Jaspar

Match Rank:1
Score:0.60
Offset:-1
Orientation:reverse strand
Alignment:-ACMARAYACTTTC
NNCNNAACAATTNT
 A C G T G C T A A G T C G T A C C G T A C T A G T C G A G A T C C G T A G A T C A G C T A C G T C G A T A G T C
G C A T G A C T A G T C G T C A C G A T C T G A C G T A A G T C C G T A T C G A A G C T G A C T G A C T G C A T

Nkx3.1(Homeobox)/LNCaP-Nkx3.1-ChIP-Seq(GSE28264)/Homer

Match Rank:2
Score:0.59
Offset:3
Orientation:forward strand
Alignment:ACMARAYACTTTC
---AAGCACTTAA
 G C T A A G T C G T A C C G T A C T A G T C G A G A T C C G T A G A T C A G C T A C G T C G A T A G T C
A C G T A C G T A C G T T C G A T C G A T A C G G A T C G T C A G T A C C G A T A G C T G T C A T G C A

PH0007.1_Barx1/Jaspar

Match Rank:3
Score:0.58
Offset:2
Orientation:forward strand
Alignment:ACMARAYACTTTC-----
--AAAGTAATTAGTGAAT
 G C T A A G T C G T A C C G T A C T A G T C G A G A T C C G T A G A T C A G C T A C G T C G A T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T G T C A G T C A T C G A T A C G G A C T T G C A G T C A A C G T A C G T C T G A A T C G A G C T C A T G G C T A C G T A G C A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.57
Offset:7
Orientation:forward strand
Alignment:ACMARAYACTTTC------
-------ACTTTCACTTTC
 G C T A A G T C G T A C C G T A C T A G T C G A G A T C C G T A G A T C A G C T A C G T C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PH0024.1_Dlx5/Jaspar

Match Rank:5
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:ACMARAYACTTTC---
NANNGNTAATTACCNN
 G C T A A G T C G T A C C G T A C T A G T C G A G A T C C G T A G A T C A G C T A C G T C G A T A G T C A C G T A C G T A C G T
A T G C T C G A A C T G T G C A T C A G A T G C G A C T G T C A C G T A G A C T C A G T C T G A A G T C A G T C A T G C T A G C

PH0053.1_Hoxa6/Jaspar

Match Rank:6
Score:0.56
Offset:2
Orientation:forward strand
Alignment:ACMARAYACTTTC-----
--AAGGTAATTACCTAAT
 G C T A A G T C G T A C C G T A C T A G T C G A G A T C C G T A G A T C A G C T A C G T C G A T A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T T C G A G T C A C T A G C A T G G A C T G T C A G C T A C A G T C A G T C T G A T G A C G A T C G A C T G T C A C G T A C A G T

PB0175.1_Sox4_2/Jaspar

Match Rank:7
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-ACMARAYACTTTC---
TNCNNAACAATTTTTNC
 A C G T G C T A A G T C G T A C C G T A C T A G T C G A G A T C C G T A G A T C A G C T A C G T C G A T A G T C A C G T A C G T A C G T
G A C T G A C T G A T C A T G C G A C T C T G A C G T A A G T C C G T A C T G A G A C T G A C T G A C T G A C T C G A T A G T C A T G C

NFATC3/MA0625.1/Jaspar

Match Rank:8
Score:0.55
Offset:7
Orientation:forward strand
Alignment:ACMARAYACTTTC----
-------ATTTTCCATT
 G C T A A G T C G T A C C G T A C T A G T C G A G A T C C G T A G A T C A G C T A C G T C G A T A G T C A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A G A C T C G A T G C A T A G C T G T A C A T G C C T G A G A C T G C A T

PH0022.1_Dlx3/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:forward strand
Alignment:ACMARAYACTTTC----
TCGCGATAATTACCGAC
 G C T A A G T C G T A C C G T A C T A G T C G A G A T C C G T A G A T C A G C T A C G T C G A T A G T C A C G T A C G T A C G T A C G T
A C G T G T A C T C A G T G A C C A G T C T G A A G C T C G T A C G T A A C G T C A G T C T G A A G T C G T A C T A C G G C T A G T A C

PRDM1/MA0508.1/Jaspar

Match Rank:10
Score:0.55
Offset:5
Orientation:reverse strand
Alignment:ACMARAYACTTTC-------
-----TCACTTTCACTTTCN
 G C T A A G T C G T A C C G T A C T A G T C G A G A T C C G T A G A T C A G C T A C G T C G A T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T