Information for 7-AAATCTTCAGTGA (Motif 10)

T C G A T C G A C G T A G A C T A G T C G A C T A C G T A T G C C G T A A C T G C G A T T C A G C T G A
Reverse Opposite:
A G C T A G T C G C T A T G A C C G A T A T C G C G T A C T G A A C T G C T G A C G A T A C G T A C G T
p-value:1e-10
log p-value:-2.322e+01
Information Content per bp:1.683
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif3.25%
Number of Background Sequences with motif45.2
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets34.1 +/- 24.8bp
Average Position of motif in Background54.6 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0005.1_Bbx_1/Jaspar

Match Rank:1
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:AAATCTTCAGTGA----
--NANTTCATTGAATTA
 T C G A T C G A C G T A G A C T A G T C G A C T A C G T A T G C C G T A A C T G C G A T T C A G C T G A A C G T A C G T A C G T A C G T
A C G T A C G T G A T C C G T A T A G C C G A T C G A T T G A C G C T A G C A T C G A T A C T G C G T A G C T A G A C T C G A T C G T A

PH0115.1_Nkx2-6/Jaspar

Match Rank:2
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:AAATCTTCAGTGA----
-AATNTTAAGTGGNTNN
 T C G A T C G A C G T A G A C T A G T C G A C T A C G T A T G C C G T A A C T G C G A T T C A G C T G A A C G T A C G T A C G T A C G T
A C G T C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A

Nkx2-5(var.2)/MA0503.1/Jaspar

Match Rank:3
Score:0.64
Offset:4
Orientation:reverse strand
Alignment:AAATCTTCAGTGA--
----CTTGAGTGGCT
 T C G A T C G A C G T A G A C T A G T C G A C T A C G T A T G C C G T A A C T G C G A T T C A G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A T G C G A C T C A G T C T A G C G T A A C T G C G A T A C T G A T C G G A T C G A C T

SOX8/MA0868.1/Jaspar

Match Rank:4
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--AAATCTTCAGTGA-
AACAATGTGCAGTGTT
 A C G T A C G T T C G A T C G A C G T A G A C T A G T C G A C T A C G T A T G C C G T A A C T G C G A T T C A G C T G A A C G T
C G T A C G T A G T A C C T G A C G T A A C G T C T A G C G A T A C T G A G T C C G T A C A T G A C G T A C T G C G A T A G C T

PH0113.1_Nkx2-4/Jaspar

Match Rank:5
Score:0.60
Offset:1
Orientation:reverse strand
Alignment:AAATCTTCAGTGA----
-AATTTCAAGTGGCTTN
 T C G A T C G A C G T A G A C T A G T C G A C T A C G T A T G C C G T A A C T G C G A T T C A G C T G A A C G T A C G T A C G T A C G T
A C G T C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:6
Score:0.60
Offset:5
Orientation:forward strand
Alignment:AAATCTTCAGTGA--
-----TTRAGTGSYK
 T C G A T C G A C G T A G A C T A G T C G A C T A C G T A T G C C G T A A C T G C G A T T C A G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T

Nkx2.1(Homeobox)/LungAC-Nkx2.1-ChIP-Seq(GSE43252)/Homer

Match Rank:7
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:AAATCTTCAGTGA-
----CTYRAGTGSY
 T C G A T C G A C G T A G A C T A G T C G A C T A C G T A T G C C G T A A C T G C G A T T C A G C T G A A C G T
A C G T A C G T A C G T A C G T A T G C G C A T A G C T C T A G C G T A A C T G C G A T C T A G A T G C G A T C

Brn2(POU,Homeobox)/NPC-Brn2-ChIP-Seq(GSE35496)/Homer

Match Rank:8
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAATCTTCAGTGA
GAATATTCAT---
 T C G A T C G A C G T A G A C T A G T C G A C T A C G T A T G C C G T A A C T G C G A T T C A G C T G A
T C A G G T C A C G T A A G C T C G T A G A C T C A G T A T G C T C G A C G A T A C G T A C G T A C G T

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:9
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:AAATCTTCAGTGA--
-----TTGAGTGSTT
 T C G A T C G A C G T A G A C T A G T C G A C T A C G T A T G C C G T A A C T G C G A T T C A G C T G A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T

Nkx2.2(Homeobox)/NPC-Nkx2.2-ChIP-Seq(GSE61673)/Homer

Match Rank:10
Score:0.59
Offset:4
Orientation:forward strand
Alignment:AAATCTTCAGTGA-
----BTBRAGTGSN
 T C G A T C G A C G T A G A C T A G T C G A C T A C G T A T G C C G T A A C T G C G A T T C A G C T G A A C G T
A C G T A C G T A C G T A C G T A T G C G A C T A G C T C T A G C G T A C T A G C G A T C T A G A T C G G A T C