Information for 1-TGGTCACTGTWYTGAW (Motif 1)

A C G T C T A G T C A G A C G T G A T C G T C A T A G C A C G T A C T G A C G T C G A T G A T C A C G T T A C G C G T A C G A T
Reverse Opposite:
C G T A A C G T A T G C G T C A C T A G G C T A T G C A G T A C C G T A A T C G C A G T C T A G C G T A A G T C A G T C C G T A
p-value:1e-20
log p-value:-4.747e+01
Information Content per bp:1.724
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif2.03%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets34.7 +/- 19.4bp
Average Position of motif in Background35.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

FXR(NR),IR1/Liver-FXR-ChIP-Seq(Chong_et_al.)/Homer

Match Rank:1
Score:0.53
Offset:-1
Orientation:reverse strand
Alignment:-TGGTCACTGTWYTGAW
NAGGTCANTGACCT---
 A C G T A C G T C T A G T C A G A C G T G A T C G T C A T A G C A C G T A C T G A C G T C G A T G A T C A C G T T A C G C G T A C G A T
T C A G T C G A C T A G C A T G A C G T A T G C T C G A G A C T A G C T T A C G T G C A G T A C G T A C A G C T A C G T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:2
Score:0.52
Offset:6
Orientation:forward strand
Alignment:TGGTCACTGTWYTGAW
------ATGGGGTGAT
 A C G T C T A G T C A G A C G T G A T C G T C A T A G C A C G T A C T G A C G T C G A T G A T C A C G T T A C G C G T A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A C G T A T C G C T A G A T C G T A C G A C G T A C T G C G T A A G C T

GLI2/MA0734.1/Jaspar

Match Rank:3
Score:0.52
Offset:-5
Orientation:reverse strand
Alignment:-----TGGTCACTGTWYTGAW
CAGTGTGGTCGC---------
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C G T G A T C G T C A T A G C A C G T A C T G A C G T C G A T G A T C A C G T T A C G C G T A C G A T
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:4
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TGGTCACTGTWYTGAW
AGGTCA----------
 A C G T C T A G T C A G A C G T G A T C G T C A T A G C A C G T A C T G A C G T C G A T G A T C A C G T T A C G C G T A C G A T
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Pax2/MA0067.1/Jaspar

Match Rank:5
Score:0.50
Offset:1
Orientation:forward strand
Alignment:TGGTCACTGTWYTGAW
-AGTCACGC-------
 A C G T C T A G T C A G A C G T G A T C G T C A T A G C A C G T A C T G A C G T C G A T G A T C A C G T T A C G C G T A C G A T
A C G T G C T A C T A G G C A T A G T C C T G A G A T C C A T G A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0196.1_Zbtb7b_2/Jaspar

Match Rank:6
Score:0.50
Offset:-7
Orientation:reverse strand
Alignment:-------TGGTCACTGTWYTGAW
NNANTGGTGGTCTTNNN------
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C G T G A T C G T C A T A G C A C G T A C T G A C G T C G A T G A T C A C G T T A C G C G T A C G A T
T C A G A G C T G T C A T G C A C G A T C T A G C T A G C A G T A T C G C A T G C A G T T G A C A C G T G A C T G T C A G C A T C T A G A C G T A C G T A C G T A C G T A C G T A C G T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:TGGTCACTGTWYTGAW
------ATGGGGTGAT
 A C G T C T A G T C A G A C G T G A T C G T C A T A G C A C G T A C T G A C G T C G A T G A T C A C G T T A C G C G T A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A A G C T C A T G A C T G A T C G T A C G G A C T A T C G C G T A A G C T

RXRA::VDR/MA0074.1/Jaspar

Match Rank:8
Score:0.48
Offset:0
Orientation:forward strand
Alignment:TGGTCACTGTWYTGAW
GGGTCAACGAGTTCA-
 A C G T C T A G T C A G A C G T G A T C G T C A T A G C A C G T A C T G A C G T C G A T G A T C A C G T T A C G C G T A C G A T
C T A G A C T G A C T G A C G T A G T C C T G A G C A T A G T C C T A G C T A G A C T G A C G T C G A T A G T C T C G A A C G T

SREBF1/MA0595.1/Jaspar

Match Rank:9
Score:0.48
Offset:6
Orientation:reverse strand
Alignment:TGGTCACTGTWYTGAW
------GTGGGGTGAT
 A C G T C T A G T C A G A C G T G A T C G T C A T A G C A C G T A C T G A C G T C G A T G A T C A C G T T A C G C G T A C G A T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G A C G T A T C G C T A G A T C G A T C G A C G T A C T G C G T A A G C T

ZBTB7C/MA0695.1/Jaspar

Match Rank:10
Score:0.48
Offset:-5
Orientation:reverse strand
Alignment:-----TGGTCACTGTWYTGAW
NTCGGTGGTCGC---------
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G T C A G A C G T G A T C G T C A T A G C A C G T A C T G A C G T C G A T G A T C A C G T T A C G C G T A C G A T
A C G T C A G T A G T C C A T G C A T G C A G T T C A G A C T G C A G T G A T C A T C G G A T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T