Information for 2-GGGATTCCAC (Motif 9)

C T A G C A T G C T A G G C T A A C G T A C G T T G A C A G T C G C T A A T G C
Reverse Opposite:
T A C G C G A T A C T G A C T G T G C A T G C A C G A T G A T C G T A C A G T C
p-value:1e-9
log p-value:-2.300e+01
Information Content per bp:1.683
Number of Target Sequences with motif93.0
Percentage of Target Sequences with motif10.90%
Number of Background Sequences with motif2539.5
Percentage of Background Sequences with motif5.33%
Average Position of motif in Targets53.1 +/- 23.5bp
Average Position of motif in Background50.2 +/- 27.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p50,p52(RHD)/Monocyte-p50-ChIP-Chip(Schreiber_et_al.)/Homer

Match Rank:1
Score:0.80
Offset:-1
Orientation:reverse strand
Alignment:-GGGATTCCAC-
GGGGATTCCCCC
 A C G T C T A G C A T G C T A G G C T A A C G T A C G T T G A C A G T C G C T A A T G C A C G T
A C T G C T A G C A T G T C A G G C T A G A C T A G C T A G T C A G T C G A T C G A T C A G T C

NFKB2/MA0778.1/Jaspar

Match Rank:2
Score:0.76
Offset:-2
Orientation:forward strand
Alignment:--GGGATTCCAC-
AGGGGATTCCCCT
 A C G T A C G T C T A G C A T G C T A G G C T A A C G T A C G T T G A C A G T C G C T A A T G C A C G T
T G C A T C A G A C T G C A T G C T A G T G C A G C A T G A C T G A T C G T A C G A T C G A T C A G C T

NFKB1/MA0105.4/Jaspar

Match Rank:3
Score:0.76
Offset:-2
Orientation:reverse strand
Alignment:--GGGATTCCAC-
AGGGGATTCCCCT
 A C G T A C G T C T A G C A T G C T A G G C T A A C G T A C G T T G A C A G T C G C T A A T G C A C G T
T G C A C T A G C A T G C A T G C T A G T C G A G C A T A G C T G A T C G T A C T A G C G A T C A C G T

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:4
Score:0.74
Offset:0
Orientation:reverse strand
Alignment:GGGATTCCAC--
GGGATTGCATNN
 C T A G C A T G C T A G G C T A A C G T A C G T T G A C A G T C G C T A A T G C A C G T A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

REL/MA0101.1/Jaspar

Match Rank:5
Score:0.70
Offset:-2
Orientation:forward strand
Alignment:--GGGATTCCAC
GGGGATTTCC--
 A C G T A C G T C T A G C A T G C T A G G C T A A C G T A C G T T G A C A G T C G C T A A T G C
A T C G A C T G C A T G C T A G G T C A C G A T C G A T C G A T A G T C G T A C A C G T A C G T

TEAD4(TEA)/Tropoblast-Tead4-ChIP-Seq(GSE37350)/Homer

Match Rank:6
Score:0.68
Offset:1
Orientation:reverse strand
Alignment:GGGATTCCAC-
-RCATTCCWGG
 C T A G C A T G C T A G G C T A A C G T A C G T T G A C A G T C G C T A A T G C A C G T
A C G T C T A G T G A C C G T A C G A T C G A T A G T C G T A C C G T A A T C G A T C G

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:7
Score:0.66
Offset:-3
Orientation:forward strand
Alignment:---GGGATTCCAC
NGGGGATTTCCC-
 A C G T A C G T A C G T C T A G C A T G C T A G G C T A A C G T A C G T T G A C A G T C G C T A A T G C
C G T A C A T G C A T G A C T G C T A G T C G A G C A T C G A T A G C T A G T C G A T C G T A C A C G T

SPIB/MA0081.1/Jaspar

Match Rank:8
Score:0.65
Offset:4
Orientation:reverse strand
Alignment:GGGATTCCAC-
----TTCCTCT
 C T A G C A T G C T A G G C T A A C G T A C G T T G A C A G T C G C T A A T G C A C G T
A C G T A C G T A C G T A C G T C G A T C G A T G A T C A G T C A C G T A T G C C G A T

MF0003.1_REL_class/Jaspar

Match Rank:9
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-GGGATTCCAC
GGGGATTTCC-
 A C G T C T A G C A T G C T A G G C T A A C G T A C G T T G A C A G T C G C T A A T G C
A T C G A C T G C A T G C T A G G C T A C G A T A G C T G A C T G A T C G T A C A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:10
Score:0.65
Offset:4
Orientation:forward strand
Alignment:GGGATTCCAC
----ATCCAC
 C T A G C A T G C T A G G C T A A C G T A C G T T G A C A G T C G C T A A T G C
A C G T A C G T A C G T A C G T T G C A G C A T A G T C A G T C C G T A A T G C