Information for 1-CACACAGACCCAC (Motif 5)

A G T C C G T A A G T C C G T A A G T C C G T A A C T G C T G A G T A C A T G C A G T C C T G A A G T C
Reverse Opposite:
C T A G A G C T A C T G A T C G A C T G A G C T A G T C A C G T A C T G A C G T A C T G A C G T A C T G
p-value:1e-11
log p-value:-2.661e+01
Information Content per bp:1.903
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.70%
Number of Background Sequences with motif2.4
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets52.7 +/- 23.7bp
Average Position of motif in Background26.3 +/- 11.5bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0151.1_Myf6_2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-CACACAGACCCAC-
AGCAACAGCCGCACC
 A C G T A G T C C G T A A G T C C G T A A G T C C G T A A C T G C T G A G T A C A T G C A G T C C T G A A G T C A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

PB0130.1_Gm397_2/Jaspar

Match Rank:2
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CACACAGACCCAC
AGCGGCACACACGCAA--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A A C T G C T G A G T A C A T G C A G T C C T G A A G T C
C T G A T C A G G T A C T C A G C T A G T G A C C T G A G A T C T C G A A T G C T G C A G T A C A C T G G A T C T G C A G T C A A C G T A C G T

Reverb(NR),DR2/RAW-Reverba.biotin-ChIP-Seq(GSE45914)/Homer

Match Rank:3
Score:0.59
Offset:-3
Orientation:reverse strand
Alignment:---CACACAGACCCAC
TGACCCAGTGACCTAC
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A A C T G C T G A G T A C A T G C A G T C C T G A A G T C
G C A T T A C G G C T A A T G C G T A C A G T C T G C A T A C G C G A T C A T G T G C A T G A C G A T C G A C T T C G A T A G C

KLF10(Zf)/HEK293-KLF10.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:CACACAGACCCAC
-GGACACACCCCC
 A G T C C G T A A G T C C G T A A G T C C G T A A C T G C T G A G T A C A T G C A G T C C T G A A G T C
A C G T T C A G T A C G G T C A A G T C G T C A A G T C C T G A A G T C G T A C G A T C G T A C A G T C

POL009.1_DCE_S_II/Jaspar

Match Rank:5
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CACACAGACCCAC
--CACAGN-----
 A G T C C G T A A G T C C G T A A G T C C G T A A C T G C T G A G T A C A T G C A G T C C T G A A G T C
A C G T A C G T T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:6
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:CACACAGACCCAC
-ACAAAG------
 A G T C C G T A A G T C C G T A A G T C C G T A A C T G C T G A G T A C A T G C A G T C C T G A A G T C
A C G T G T C A A T G C C G T A T G C A C G T A C T A G A C G T A C G T A C G T A C G T A C G T A C G T

PB0208.1_Zscan4_2/Jaspar

Match Rank:7
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CACACAGACCCAC
CGAAGCACACAAAATA--
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A G T C C G T A A C T G C T G A G T A C A T G C A G T C C T G A A G T C
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A A C G T A C G T

Sox9(HMG)/Limb-SOX9-ChIP-Seq(GSE73225)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CACACAGACCCAC
-ACAAAGGNBCCT
 A G T C C G T A A G T C C G T A A G T C C G T A A C T G C T G A G T A C A T G C A G T C C T G A A G T C
A C G T G C T A T A G C C G T A T C G A C G T A T C A G T A C G T C A G A G T C A G T C G A T C G C A T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.53
Offset:3
Orientation:reverse strand
Alignment:CACACAGACCCAC
---CCAGACRSVB
 A G T C C G T A A G T C C G T A A G T C C G T A A C T G C T G A G T A C A T G C A G T C C T G A A G T C
A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:10
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:CACACAGACCCAC
CACGCA-------
 A G T C C G T A A G T C C G T A A G T C C G T A A C T G C T G A G T A C A T G C A G T C C T G A A G T C
A G T C C G T A G T A C C T A G G T A C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T