Information for 13-TTCCTGCCTGCCT (Motif 24)

C G A T A C G T A T G C A G T C A C G T A C T G A T G C A G T C A G C T T C A G A G T C A T G C A C G T
Reverse Opposite:
C G T A A T C G C T A G A G T C C T G A A C T G T A C G T G A C C G T A C T A G A T C G T G C A C G T A
p-value:1e-7
log p-value:-1.810e+01
Information Content per bp:1.781
Number of Target Sequences with motif9.0
Percentage of Target Sequences with motif1.05%
Number of Background Sequences with motif33.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets48.9 +/- 22.6bp
Average Position of motif in Background52.5 +/- 28.6bp
Strand Bias (log2 ratio + to - strand density)1.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

EWSR1-FLI1/MA0149.1/Jaspar

Match Rank:1
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--TTCCTGCCTGCCT---
CCTTCCTTCCTTCCTTCC
 A C G T A C G T C G A T A C G T A T G C A G T C A C G T A C T G A T G C A G T C A G C T T C A G A G T C A T G C A C G T A C G T A C G T A C G T
A G T C G A T C G A C T C A G T A T G C A G T C A C G T A C G T A T G C G T A C A G C T A G C T G A T C A G T C A G C T A G C T A G T C A G T C

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:TTCCTGCCTGCCT--
GTCATGCHTGRCTGS
 C G A T A C G T A T G C A G T C A C G T A C T G A T G C A G T C A G C T T C A G A G T C A T G C A C G T A C G T A C G T
A C T G A G C T A G T C G T C A A G C T T C A G A T G C G A T C G C A T A T C G T C G A T A G C C G A T C A T G T A G C

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:3
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-TTCCTGCCTGCCT
NNACTTGCCTT---
 A C G T C G A T A C G T A T G C A G T C A C G T A C T G A T G C A G T C A G C T T C A G A G T C A T G C A C G T
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T

ERG(ETS)/VCaP-ERG-ChIP-Seq(GSE14097)/Homer

Match Rank:4
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:TTCCTGCCTGCCT
-CACTTCCTGT--
 C G A T A C G T A T G C A G T C A C G T A C T G A T G C A G T C A G C T T C A G A G T C A T G C A C G T
A C G T A G T C T C G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G A G C T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:5
Score:0.54
Offset:4
Orientation:reverse strand
Alignment:TTCCTGCCTGCCT-
----TTCCCGCCWG
 C G A T A C G T A T G C A G T C A C G T A C T G A T G C A G T C A G C T T C A G A G T C A T G C A C G T A C G T
A C G T A C G T A C G T A C G T A G C T A C G T A T G C A T G C A G T C A C T G A G T C A T G C G C T A A T C G

PB0029.1_Hic1_1/Jaspar

Match Rank:6
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TTCCTGCCTGCCT---
ACTATGCCAACCTACC
 C G A T A C G T A T G C A G T C A C G T A C T G A T G C A G T C A G C T T C A G A G T C A T G C A C G T A C G T A C G T A C G T
C G T A A G T C A C G T C T G A A C G T C T A G A T G C A G T C G T C A T G C A A G T C A G T C G C A T C T G A G A T C G A T C

EWS:ERG-fusion(ETS)/CADO_ES1-EWS:ERG-ChIP-Seq(SRA014231)/Homer

Match Rank:7
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TTCCTGCCTGCCT
ATTTCCTGTN-----
 A C G T A C G T C G A T A C G T A T G C A G T C A C G T A C T G A T G C A G T C A G C T T C A G A G T C A T G C A C G T
T C G A A G C T A C G T A C G T A G T C A G T C A C G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T

Etv2(ETS)/ES-ER71-ChIP-Seq(GSE59402)/Homer(0.967)

Match Rank:8
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----TTCCTGCCTGCCT
NNAYTTCCTGHN-----
 A C G T A C G T A C G T A C G T C G A T A C G T A T G C A G T C A C G T A C T G A T G C A G T C A G C T T C A G A G T C A T G C A C G T
A T G C A G T C C T G A A G T C C G A T A C G T A G T C A G T C A C G T A T C G G A C T A C G T A C G T A C G T A C G T A C G T A C G T

E2F6/MA0471.1/Jaspar

Match Rank:9
Score:0.53
Offset:2
Orientation:reverse strand
Alignment:TTCCTGCCTGCCT
--NCTTCCCGCCC
 C G A T A C G T A T G C A G T C A C G T A C T G A T G C A G T C A G C T T C A G A G T C A T G C A C G T
A C G T A C G T A G T C A G T C A G C T A C G T A T G C A G T C A G T C C A T G A G T C A G T C G A T C

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:10
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TTCCTGCCTGCCT
CTGGCAGNCTGCCA
 A C G T C G A T A C G T A T G C A G T C A C G T A C T G A T G C A G T C A G C T T C A G A G T C A T G C A C G T
A G T C C G A T A C T G A T C G T G A C G C T A C A T G A T C G T G A C C G A T A C T G T A G C G T A C G T C A