Information for 3-CGGGCACCCGCCGCTG (Motif 15)

A G T C C T A G T A C G A C T G G T A C G T C A T A G C T G A C A T G C T C A G A G T C T A G C A C T G G T A C A G C T A C T G
Reverse Opposite:
A G T C C T G A A C T G G T A C A T C G A C T G A G T C A T C G A C T G A T C G A C G T A C T G A G T C A G T C A G T C A C T G
p-value:1e-9
log p-value:-2.243e+01
Information Content per bp:1.767
Number of Target Sequences with motif12.0
Percentage of Target Sequences with motif1.40%
Number of Background Sequences with motif49.4
Percentage of Background Sequences with motif0.10%
Average Position of motif in Targets53.3 +/- 25.8bp
Average Position of motif in Background55.6 +/- 29.7bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NHLH1/MA0048.2/Jaspar

Match Rank:1
Score:0.60
Offset:8
Orientation:forward strand
Alignment:CGGGCACCCGCCGCTG--
--------CGCAGCTGCG
 A G T C C T A G T A C G A C T G G T A C G T C A T A G C T G A C A T G C T C A G A G T C T A G C A C T G G T A C A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G

ZIC3/MA0697.1/Jaspar

Match Rank:2
Score:0.60
Offset:4
Orientation:forward strand
Alignment:CGGGCACCCGCCGCTG---
----GACCCCCCGCTGCGC
 A G T C C T A G T A C G A C T G G T A C G T C A T A G C T G A C A T G C T C A G A G T C T A G C A C T G G T A C A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T C G A G T A C G A T C G T A C A G T C A G T C A G T C T C A G A G T C A C G T C A T G G A T C C A T G G T A C

ZIC1/MA0696.1/Jaspar

Match Rank:3
Score:0.59
Offset:4
Orientation:forward strand
Alignment:CGGGCACCCGCCGCTG--
----GACCCCCCGCTGTG
 A G T C C T A G T A C G A C T G G T A C G T C A T A G C T G A C A T G C T C A G A G T C T A G C A C T G G T A C A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:4
Score:0.59
Offset:7
Orientation:reverse strand
Alignment:CGGGCACCCGCCGCTG-
-------CAGCAGCTGN
 A G T C C T A G T A C G A C T G G T A C G T C A T A G C T G A C A T G C T C A G A G T C T A G C A C T G G T A C A G C T A C T G A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:5
Score:0.57
Offset:6
Orientation:reverse strand
Alignment:CGGGCACCCGCCGCTG--
------NNAGCAGCTGCT
 A G T C C T A G T A C G A C T G G T A C G T C A T A G C T G A C A T G C T C A G A G T C T A G C A C T G G T A C A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C A G T A G C C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T

Myog/MA0500.1/Jaspar

Match Rank:6
Score:0.57
Offset:7
Orientation:reverse strand
Alignment:CGGGCACCCGCCGCTG--
-------NNGCAGCTGTC
 A G T C C T A G T A C G A C T G G T A C G T C A T A G C T G A C A T G C T C A G A G T C T A G C A C T G G T A C A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C

PB0003.1_Ascl2_1/Jaspar

Match Rank:7
Score:0.56
Offset:4
Orientation:reverse strand
Alignment:CGGGCACCCGCCGCTG-----
----NNNNAGCAGCTGCTGAN
 A G T C C T A G T A C G A C T G G T A C G T C A T A G C T G A C A T G C T C A G A G T C T A G C A C T G G T A C A G C T A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

E2A(bHLH)/proBcell-E2A-ChIP-Seq(GSE21978)/Homer

Match Rank:8
Score:0.56
Offset:9
Orientation:reverse strand
Alignment:CGGGCACCCGCCGCTG---
---------GCAGCTGTNN
 A G T C C T A G T A C G A C T G G T A C G T C A T A G C T G A C A T G C T C A G A G T C T A G C A C T G G T A C A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T C A G A G T C C G T A A T C G T A G C A C G T A C T G A G C T A C T G G C A T

ZIC4/MA0751.1/Jaspar

Match Rank:9
Score:0.56
Offset:4
Orientation:forward strand
Alignment:CGGGCACCCGCCGCTG---
----GACCCCCCGCTGTGC
 A G T C C T A G T A C G A C T G G T A C G T C A T A G C T G A C A T G C T C A G A G T C T A G C A C T G G T A C A G C T A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C T G T C G A G T A C G T A C G T A C G T A C G T A C G A T C C T A G A G T C C A G T C T A G G A C T A C T G G T A C

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.56
Offset:7
Orientation:reverse strand
Alignment:CGGGCACCCGCCGCTG--
-------NNGCAGCTGTT
 A G T C C T A G T A C G A C T G G T A C G T C A T A G C T G A C A T G C T C A G A G T C T A G C A C T G G T A C A G C T A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T