Information for 4-AGTGGCTCTT (Motif 18)

C G T A T A C G C G A T C T A G A C T G T G A C C G A T A G T C A G C T A G C T
Reverse Opposite:
C T G A C T G A A C T G C G T A A C T G A G T C G A T C C G T A A G T C C G A T
p-value:1e-7
log p-value:-1.782e+01
Information Content per bp:1.838
Number of Target Sequences with motif13.0
Percentage of Target Sequences with motif2.93%
Number of Background Sequences with motif179.0
Percentage of Background Sequences with motif0.37%
Average Position of motif in Targets50.0 +/- 25.3bp
Average Position of motif in Background52.0 +/- 29.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.08
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0114.1_Nkx2-5/Jaspar

Match Rank:1
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------AGTGGCTCTT
AAATTCAAGTGGNTTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G C G A T C T A G A C T G T G A C C G A T A G T C A G C T A G C T
C T G A C T G A C G T A A G C T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T C G T A A C G T

PH0115.1_Nkx2-6/Jaspar

Match Rank:2
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------AGTGGCTCTT
AATNTTAAGTGGNTNN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G C G A T C T A G A C T G T G A C C G A T A G T C A G C T A G C T
C T G A C T G A C G A T A C T G G C A T A G C T C T G A C G T A A C T G C G A T C T A G A T C G G T A C G A C T G A C T G C T A A C G T

Bapx1(Homeobox)/VertebralCol-Bapx1-ChIP-Seq(GSE36672)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---AGTGGCTCTT
TTRAGTGSYK---
 A C G T A C G T A C G T C G T A T A C G C G A T C T A G A C T G T G A C C G A T A G T C A G C T A G C T
A G C T G A C T C T A G C G T A C A T G C G A T C T A G A T C G G A C T C A G T A C G T A C G T A C G T

PH0113.1_Nkx2-4/Jaspar

Match Rank:4
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------AGTGGCTCTT
AATTTCAAGTGGCTTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G C G A T C T A G A C T G T G A C C G A T A G T C A G C T A G C T
C T G A C G T A C G A T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G A G T C G C A T G A C T C G T A A C G T

PH0171.1_Nkx2-1/Jaspar

Match Rank:5
Score:0.60
Offset:-7
Orientation:reverse strand
Alignment:-------AGTGGCTCTT
AANTTCAAGTGGCTTN-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G C G A T C T A G A C T G T G A C C G A T A G T C A G C T A G C T
C G T A C G T A C A G T A C G T G C A T A G T C C T G A C G T A A C T G C G A T C T A G A T C G T A G C G A C T A C G T T C G A A C G T

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:6
Score:0.59
Offset:-7
Orientation:reverse strand
Alignment:-------AGTGGCTCTT
NTNNTTAAGTGGNTNAN
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G T A T A C G C G A T C T A G A C T G T G A C C G A T A G T C A G C T A G C T
T C G A A G C T A G T C A T G C G C A T C G A T C T G A C G T A A C T G C G A T C T A G A T C G G A C T A G C T G C T A C G T A C A T G

Nkx2.5(Homeobox)/HL1-Nkx2.5.biotin-ChIP-Seq(GSE21529)/Homer

Match Rank:7
Score:0.58
Offset:-3
Orientation:reverse strand
Alignment:---AGTGGCTCTT
TTGAGTGSTT---
 A C G T A C G T A C G T C G T A T A C G C G A T C T A G A C T G T G A C C G A T A G T C A G C T A G C T
G C A T A C G T C T A G C G T A C A T G C G A T C T A G A T C G G A C T G A C T A C G T A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:reverse strand
Alignment:AGTGGCTCTT
---NGCTN--
 C G T A T A C G C G A T C T A G A C T G T G A C C G A T A G T C A G C T A G C T
A C G T A C G T A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:9
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:AGTGGCTCTT
-GTGGAT---
 C G T A T A C G C G A T C T A G A C T G T G A C C G A T A G T C A G C T A G C T
A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T A C G T

POL004.1_CCAAT-box/Jaspar

Match Rank:10
Score:0.56
Offset:-2
Orientation:reverse strand
Alignment:--AGTGGCTCTT
TGATTGGCTANN
 A C G T A C G T C G T A T A C G C G A T C T A G A C T G T G A C C G A T A G T C A G C T A G C T
A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T